LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo4g01851	ATGGTGAAATCTAGTTCCTGTTTAAGGTTAATCACATGCGGTGGTGGTAGTGACAAAGAAGATCATCATGTTGTTTCTGAGGTCAAGGATTCGAATGATAAACGCGGTTGGAGTTTTCGGAAGAGATCTGCAAGGCATCGTGTGCTCAGCAATACTGTGATAACAACAGAGACCACATCATCGGCAAATAAGGAGACTTCAGAATATCCAAGTATTAGTTTTCAATCCTCAGCTGAGCCTAATGTTGTTGAGAAGATTTGTACAACAGATTTCTCTAATGAGAAGCCGCAGTTATCCTCCGATGTTTGTTCGGAGATGCCAGAAACAATTGTCACCGAAACTGAGAGTAAGGTGGATGTCAATCCACCGGAATCTGCTGTGATAATCATCCAGGCTTCAATTAGAGGATATTTGGCTCGGAGAGCACTTCTAAAGAGTAAGAATGTAGTGAAGTTGCAAGCTGCTGTTCGCGGTCACTTGGTTAGAAGGCATGCTGTTGGAACATTGCGATGTGTTCAAGCTATTGCTAAAATGCAGCTCCTTGTACGAGCACGACATGCTCAGAAGTCACATACCGATGGAAAAAATGATTACTCAAAAACTACGGATAATGAGCATTACACTGCCGAATCAAATGTGAAGCATACTTCTGTGGAAAAGCTTCTCAGCAATAAGTTTGCTTGTCAGCTGTTGGAATCAACACCAAAAAACAAACCTATCCATGTCAAATGTGATCCTTCTAAAGGTGATTCTGCTTGGAAATGGTTGGAGAGATGGATGTTTGTTTCGGCAAAAGATTCTGCAGACGATAAAAAGCCAATTTGTACGACTGAACAGTCGGAGGAAACCAAAGATAGCACTCATGCATCTCAATCGGAAACAGATATTCCATCTCAAGTTATTCTTCAGTTAGCCGATTCACCTCTACCATCCGAGGATGAAGAGAAGACTGCCACTTACTATGATACCAACTCTCACTTTCAAGCAAGCTTGTCTTCATCTTCTCTTATAAAAGATAACTTGGAAGAGGCTCCTCCCGAAAAGACGGGTACATATGATTCTAAAGTAACCTCCACTGAAATTGATTCTTTCCAAAATGAGATAATGGAATCAAATGCAAATGTCGTACATGAGCCTAATTCTCCTCAGAATCAAGAAATTGATGAACAGTACAAACAATCAACAAAAGCATTTGCCTCAGACCAACTAGAGACTGAGGGAAAGAAAATTACATTTGGAACAAGGAAGTTAAGCAATCCCTCATTTATTGCCGCTCAATCAAAATTTGAAGAGATGAGTTCAAATTCAAATTCGGGTAGGCCGAGTGGTTTGCTCGACCAGGATGTATCGGTTGAGTCACAAGCAGATAGTGCATATATATCAAAAGAGTTCATTTCATCTGAGAATTCTACACCCTATCCTTCCAGAAATGCTGATCCTGAAAGTGGTACCGTGCTATCTATTTCTTCAACTCTTGATTCACCTGACAGATCAGAGACTTTGGAAATTGAGCACGATGCCAAAGATTTAGTAGAAGGGATAGTTAATCCTGAAAACAAGATTGATCGTGGTGTTGAAGCCAATACTCCGACTTCTAACTTACCTATCTCTAATTCAGATCAATTAGAAACTGTTAATGGCTCCCGTGGCAATGTTGTTGATTCAGTGATGCCTGAGCACTCCAAAGAGCATTCTGTTGAGCCTGAGAAAATTGCATCTGACTTGTTGAGAGAACAAACCGAGACTGTTCTGCAGGATTTCACGTATTCTCAACAAGCTTCACCGGGAAGCTATATGACAATTCCTGAATCTCAAGGAACACCTTCAAGTCAGGTTTCGGTGAAAACTAAAGAGAATAAAATTAACAAGACTGGATCAAGCAGTAGACGCAGGGTACTGTCTGTTGCTAACAAGTCTCCTGCTAATTCAAATCAAGATTCAGGCTCAAGAGTGTCTGTCGGTACCAAGTCTCCTGCGAATGCAAATCACGATTCAGGCTCAAGAGGTAGTAGAGAACAATTGCCTAAGGATCAGCTGAATGGAAAGAGACGCAATTCATTTGGCTCAATAAAACCTGAACCCACTGATCAAGAACCTACCAAAGATAATAGTAGTAGCAATAATACTCTTCCCCGTTTCATGCAAGCTACACAATCTGCCAAGGCCAAGATAAATGCAAATTCCTCTCCAAGATCAAGTCCAGATGTGCATGACACTGACGTTAACATCAAGAAGAGACATTCCTTACCTGGTGCAACTGGTAAGCAGGGTTCTCCGCGTGTCGAACAGTCATTATCTCCAGCTCCGCAGGGCACAAAGGGCAATGGTTCAACTGAGAGAAAATGGCAGAGGTGA	2355	0.4157	MVKSSSCLRLITCGGGSDKEDHHVVSEVKDSNDKRGWSFRKRSARHRVLSNTVITTETTSSANKETSEYPSISFQSSAEPNVVEKICTTDFSNEKPQLSSDVCSEMPETIVTETESKVDVNPPESAVIIIQASIRGYLARRALLKSKNVVKLQAAVRGHLVRRHAVGTLRCVQAIAKMQLLVRARHAQKSHTDGKNDYSKTTDNEHYTAESNVKHTSVEKLLSNKFACQLLESTPKNKPIHVKCDPSKGDSAWKWLERWMFVSAKDSADDKKPICTTEQSEETKDSTHASQSETDIPSQVILQLADSPLPSEDEEKTATYYDTNSHFQASLSSSSLIKDNLEEAPPEKTGTYDSKVTSTEIDSFQNEIMESNANVVHEPNSPQNQEIDEQYKQSTKAFASDQLETEGKKITFGTRKLSNPSFIAAQSKFEEMSSNSNSGRPSGLLDQDVSVESQADSAYISKEFISSENSTPYPSRNADPESGTVLSISSTLDSPDRSETLEIEHDAKDLVEGIVNPENKIDRGVEANTPTSNLPISNSDQLETVNGSRGNVVDSVMPEHSKEHSVEPEKIASDLLREQTETVLQDFTYSQQASPGSYMTIPESQGTPSSQVSVKTKENKINKTGSSSRRRVLSVANKSPANSNQDSGSRVSVGTKSPANANHDSGSRGSREQLPKDQLNGKRRNSFGSIKPEPTDQEPTKDNSSSNNTLPRFMQATQSAKAKINANSSPRSSPDVHDTDVNIKKRHSLPGATGKQGSPRVEQSLSPAPQGTKGNGSTERKWQR	784

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo4g01851	784	PANTHER	IQ-DOMAIN 5-RELATED	31	756	-	-
	Mepo4g01851	784	MobiDBLite	consensus disorder prediction	466	499	-	-
	Mepo4g01851	784	MobiDBLite	consensus disorder prediction	270	289	-	-
	Mepo4g01851	784	MobiDBLite	consensus disorder prediction	466	496	-	-
	Mepo4g01851	784	Gene3D	-	123	174	-	-
	Mepo4g01851	784	ProSiteProfiles	IQ motif profile.	124	151	IPR000048	GO:0005515
	Mepo4g01851	784	MobiDBLite	consensus disorder prediction	590	668	-	-
	Mepo4g01851	784	SMART	iq_5	122	144	IPR000048	GO:0005515
	Mepo4g01851	784	SMART	iq_5	145	166	IPR000048	GO:0005515
	Mepo4g01851	784	MobiDBLite	consensus disorder prediction	680	736	-	-
	Mepo4g01851	784	Pfam	IQ calmodulin-binding motif	147	164	IPR000048	GO:0005515
	Mepo4g01851	784	Pfam	IQ calmodulin-binding motif	125	143	IPR000048	GO:0005515
	Mepo4g01851	784	ProSiteProfiles	IQ motif profile.	145	174	IPR000048	GO:0005515
	Mepo4g01851	784	MobiDBLite	consensus disorder prediction	590	784	-	-
	Mepo4g01851	784	MobiDBLite	consensus disorder prediction	757	784	-	-
	Mepo4g01851	784	MobiDBLite	consensus disorder prediction	270	298	-	-
	Mepo4g01851	784	MobiDBLite	consensus disorder prediction	522	546	-	-
	Mepo4g01851	784	Pfam	Protein of unknown function (DUF4005)	695	754	IPR025064	-
	Mepo4g01851	784	MobiDBLite	consensus disorder prediction	525	546	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo4g01851	Mepo-Chr4	23744092	23749172	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo4g01851	104	784	IQD Protein Family	AT1G19870	37.604	7.95e-100	320

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo4g01851	-		-	cam:101492650	1110.13