Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01847 ATGGACGACCGTGAAAATGGAAGGCACAAAGCAGATCAGTATAAATCTGCTCAGGGACAGTGGTTGATGCAACAGCATCATCAGCATCCTTCCATGAAGCAAATTATGTCAATCATGGCTGAACGAGATGCAGCCATTCAAGAAAGAAATCTGGCCCTCTCTGAGAAAAAGGCAGCACTTGCAGAACGTGACATGGCATTCCTTCAGCGAGATACTGCAATTGCGGAACGGAATAATGCACTTATGGAAAGAGATAATGCGATAGCAACCCTTCAGTTTCGAGAAAACGCTTTGGCCAATGGCGGTATGTCATCATGCCCTCCAGGATGTCAAATCTCACGGGGAGTTAAGCATATACATCATCTGCCGCAACAGGTAAACCATTTGCCTAATATGGGTGATTCTTCTTACGGCACACGTGAATTGCACACAACTGATGCCCTCCCAGCAGCACCCATTTCTTCAGAGGTTGGGAAACCACCTAGGCGTGCCAAACGACCAAAGGAAAGTAAGTCTGATTCACCTAACAAGAAGACTCCAAAATCTAGAAAAGTCAAGAAAGAGGGTGACGATTTAAACAAGACAATGTTTGCCAACAACAAAGAGCTTGAATGGAAGAGTAGTGAGGAAATGATAAATGGAGATGATGATCTTAACAAGCAGTTAGCAGTCTCAAAGGCTGATTGGAAACCTCAGGACTTGGCATTGAACCAAGTTGCATACGATGATTCAACCATGCCAGCACCAGCATGCTCTTGTACTGGTGTTCTGAGACAGTGCTACAAATGGGGTAATGGAGGTTGGCAATCTGCTTGCTGTACAACCACTTTATCGGTATATCCACTTCCAGCCGTGCCCAACAAAAGGCATGCTCGAGTAGGCGGTAGAAAAATGAGTGGAAGTGCTTTCAATAAACTACTTAGCCGGCTTGCAGCTGAAGGGCATGATCTCTCACACCCGGTTGACCTTAAAGACCATTGGGCCAAACATGGTACAAATCGATACATCACAATAAAGTAG 1020 0.452 MDDRENGRHKADQYKSAQGQWLMQQHHQHPSMKQIMSIMAERDAAIQERNLALSEKKAALAERDMAFLQRDTAIAERNNALMERDNAIATLQFRENALANGGMSSCPPGCQISRGVKHIHHLPQQVNHLPNMGDSSYGTRELHTTDALPAAPISSEVGKPPRRAKRPKESKSDSPNKKTPKSRKVKKEGDDLNKTMFANNKELEWKSSEEMINGDDDLNKQLAVSKADWKPQDLALNQVAYDDSTMPAPACSCTGVLRQCYKWGNGGWQSACCTTTLSVYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAEGHDLSHPVDLKDHWAKHGTNRYITIK 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01847 339 PANTHER - 1 339 IPR010409 -
Mepo4g01847 339 MobiDBLite consensus disorder prediction 146 198 - -
Mepo4g01847 339 SMART GAGA_bind_2 1 339 IPR010409 -
Mepo4g01847 339 MobiDBLite consensus disorder prediction 159 198 - -
Mepo4g01847 339 Coils Coil 51 71 - -
Mepo4g01847 339 MobiDBLite consensus disorder prediction 1 28 - -
Mepo4g01847 339 Pfam GAGA binding protein-like family 1 339 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01847 Mepo-Chr4 23691107 23694763 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01847 65 339 BBR or BPC Transcription factor family AT5G42520 62.199 2.83e-117 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Mepo4g01847 GAGA_bind 9.9e-103 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01847 - - tpra:123887069 643.269