Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01840 ATGGATGTGGAATACGTGAAGGCGAAGATCTCAGTTTGGTGGAACATTAACGACTGTAAATTTCCAACAAAACCCGAGTATGTTAAAACCATTGCTAACAACATTCGCTTAGCTCTGTCGAAAGCAAACCTTCTTGGAGAACTTTCCATTTCGGCTTACGGAGACACCAATCTCATCGCCAGTGAAATTCTAAACGTGCTTTCCTCCACAGGCATCTCTGTCCATCACGTCACCAGCGTCTCTGATAGTTACTTTGATGAATGTTACAAAAAGATTATTACTGATATGTCACTGTGGGCTCTAGATAATCCTAATGCTAATGTTTTGTTGATATTTGCTAATGGAGGTAATGCCGTACCAATTATCTCAAGGGCTCTTCTTAAACTTTCTATGAAAAACTACAACATTCTCCTTGCTATACCATCACAAGTTGATGCATCCCTCACTGACAAAGCCAATATCGTTTGGCTCTGGCCCGCACTCTTTTCTGGTGAGGGCCCTATGTGCATTGAAGAGTGGTCGTCGGAAGAACAAGTGCAGAAGCAAGTGCCGGGCGGGGAAAGTGACGTCTAG 573 0.4328 MDVEYVKAKISVWWNINDCKFPTKPEYVKTIANNIRLALSKANLLGELSISAYGDTNLIASEILNVLSSTGISVHHVTSVSDSYFDECYKKIITDMSLWALDNPNANVLLIFANGGNAVPIISRALLKLSMKNYNILLAIPSQVDASLTDKANIVWLWPALFSGEGPMCIEEWSSEEQVQKQVPGGESDV 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01840 190 CDD PIN_limkain_b1_N_like 9 141 - -
Mepo4g01840 190 Pfam NYN domain 9 152 IPR021139 GO:0004540
Mepo4g01840 190 PANTHER LIMKAIN B LKAP 7 172 IPR024768 GO:0005777|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01840 Mepo-Chr4 23597878 23600115 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01840 2 174 C2H2 Transcription Factor Family AT5G61190 44.253 4.09e-34 125