Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01830 ATGGCAGGTTTCTTCTCTCTAAGCAGTGGAAGAGGCAAAGAAGAAGCAAGAGAACAAGAAGAAAATAACAACAACAGTGGAAATAATAATCAGTTTTTGTTCAGAAGCGAAGAGATCTACAACAAAGGTTTTGAGATATGGCCACAACAACATCAACAATCTTCTTTTCATCATCATCAACAACAACATCAACAAAACATTAACAATTTTTACTCTTTTGGTGTTGGAAGTTCAAGAAGAAACGACGACAACAACAACGACAACGTTTCTGTTTCATTTTCTGATGAATCAACAAGATTTGGTTTAACAGTGATGAGGTCTTCAAGTGGTGGTGGTTTAGGTGGTGGTGGAATGAACTGTCAAGATTGTGGTAACCAAGCTAAGAAAGATTGTCCACATCTTAGATGTAGAACTTGTTGCAAGAGTCGAGGGTTTCAGTGTCAAACTCATGTGAAAAGTACTTGGGTTCCAGCTGCTAAACGCCGTGAACGGCAGCAACAAATCACGTCGTTGCAGCAACAAAATCAGCAGCAGCAACAGTTTCACTCGTCAAGAAGACACAGAGAAAATCAAAATGATCCTTCTGGAGCTTCTGGTTCTCTAACTTGTACTCCAGTACCTATCACTACCACAGGGTTGGAGTTGGGAAATTTTCCACCGGAGCTGAATTCACCGGCGGTGTTCCGGTGTGTAAAAGTGAGTGCAATGGATGCACAAGACGAACGTTATGCTTATCAAACAGCTGTGAACATAGGTGGAAGAGTTTTCAAGGGAATTTTGTATGATCAAGGACTTGAAGGTAGCTACACTAGCCCAAATGCTGCTGCTGGTGGTGGTGAAGGTTCTTCCGGTGGCGGTGGTGGCAGCGGCGGTGAAGGAAATCAACAAAATCTCATAACGACCACCACAAATGTGAGCAATCCATTTGAGTATTCTTCACTATATCCAGCTCCTCTTAATGCTTTCATGGCTGGTACGCAATTCTTCCCACCTCCAAGATCCTAA 1005 0.4239 MAGFFSLSSGRGKEEAREQEENNNNSGNNNQFLFRSEEIYNKGFEIWPQQHQQSSFHHHQQQHQQNINNFYSFGVGSSRRNDDNNNDNVSVSFSDESTRFGLTVMRSSSGGGLGGGGMNCQDCGNQAKKDCPHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQITSLQQQNQQQQQFHSSRRHRENQNDPSGASGSLTCTPVPITTTGLELGNFPPELNSPAVFRCVKVSAMDAQDERYAYQTAVNIGGRVFKGILYDQGLEGSYTSPNAAAGGGEGSSGGGGGSGGEGNQQNLITTTTNVSNPFEYSSLYPAPLNAFMAGTQFFPPPRS 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01830 334 MobiDBLite consensus disorder prediction 1 31 - -
Mepo4g01830 334 MobiDBLite consensus disorder prediction 272 298 - -
Mepo4g01830 334 NCBIfam LRP1 C-terminal domain 218 265 IPR006511 -
Mepo4g01830 334 NCBIfam putative zinc finger domain, LRP1 type 119 161 IPR006510 -
Mepo4g01830 334 MobiDBLite consensus disorder prediction 169 204 - -
Mepo4g01830 334 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 320 IPR007818 GO:0003700|GO:0006355
Mepo4g01830 334 MobiDBLite consensus disorder prediction 71 93 - -
Mepo4g01830 334 Pfam Domain of unknown function (DUF702) 117 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01830 Mepo-Chr4 23510546 23512019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01830 1 334 C2H2 Transcription Factor Family AT1G75520 45.429 1.63e-81 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Mepo4g01830 DUF702 5e-64 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01830 - - psat:127097211 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g01830 4 23510546 23512019 Mepo3g07891 3 91919205 91920917 PCT