Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01825 ATGATGAAATCAGGGATGGGAATAGAAGAGAGAAAACAGCTGAAAAGGCCAGCACAAGCAAGTTCAAGAAAAGGGTGTATGAGAGGTAAAGGAGGACCTGAAAATGCAAGTTGCACTTACAAAGGTGTAAGGCAGAGAACATGGGGAAAATGGGTGGCTGAAATCCGCGAACCGAATCGCGGTGCTCGTCTTTGGCTTGGTACTTTTGAAACCTCTCATGAAGCTGCTTTAGCATATGATGCTGCAGCTCGTAAACTTTATGGTTCTGATGCAAAACTTAACCTCCCAGAACTTTCTACACCCCCTCAAAATACTTCATCACCCTCTCCTACACCACCTCAAATGCAACAACAACATCCTCATATTCAAATTCAACCCAACAACAACAATAACATTAACAACAGCTTCAATATTTGTAACAACATAAACATGAACAACAACATCAACAACAACAACAGTCCTGTTTTTGTGTCTCTGTCTTCTCAACAAGTTAGTGGTGATATTACACCAATATATAGCAGTGATAATTCTGTTATGTCATTTCCATTGGATAGTACAATTACAAATACAATGGATTCAAAGGGTATGGAGATTAGTGATTCATTTTTTGGAACAGTGAATTATGAAACCATGCCAGTAATTGATGATGATTCAATTTGGACAGAAGCTGCTATGTCTTTAGATGCTGCAATTTCAATGGATTTTCCAATGATTGTTGATGATGCTGATGGAATTTATAATTCAGGTGCAAATTTTGCTGAAGTTGGTGCTTGGGATTCTCTACAAACTCCATGGTGCATGTAA 804 0.3856 MMKSGMGIEERKQLKRPAQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFETSHEAALAYDAAARKLYGSDAKLNLPELSTPPQNTSSPSPTPPQMQQQHPHIQIQPNNNNNINNSFNICNNINMNNNINNNNSPVFVSLSSQQVSGDITPIYSSDNSVMSFPLDSTITNTMDSKGMEISDSFFGTVNYETMPVIDDDSIWTEAAMSLDAAISMDFPMIVDDADGIYNSGANFAEVGAWDSLQTPWCM 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01825 267 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 14 221 - -
Mepo4g01825 267 FunFam Ethylene-responsive transcription factor 2 38 97 - -
Mepo4g01825 267 Gene3D AP2/ERF domain 39 97 IPR036955 GO:0003700|GO:0006355
Mepo4g01825 267 SUPERFAMILY DNA-binding domain 39 96 IPR016177 GO:0003677
Mepo4g01825 267 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Mepo4g01825 267 MobiDBLite consensus disorder prediction 1 17 - -
Mepo4g01825 267 MobiDBLite consensus disorder prediction 93 129 - -
Mepo4g01825 267 MobiDBLite consensus disorder prediction 1 38 - -
Mepo4g01825 267 Pfam AP2 domain 39 88 IPR001471 GO:0003700|GO:0006355
Mepo4g01825 267 CDD AP2 38 98 IPR001471 GO:0003700|GO:0006355
Mepo4g01825 267 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Mepo4g01825 267 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Mepo4g01825 267 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01825 Mepo-Chr4 23449203 23450701 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01825 15 109 AP2-EREBP Transcription Factor Family AT1G75490 81.250 2.08e-51 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo4g01825 AP2 8.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01825 - - tpra:123886830 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g01825 4 23449203 23450701 Mepo4g01825 4 23449203 23450701 ECH