Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01768 ATGTTTAATCTCTGGGGTGGCTCTCAACAAGACCAGCAAACCAAAGAGGCTTATGCTGAATCCAAGATTAAAGAGCTGAAGCTAGCAATTGGACCCTTATCAGGACACAGCTTGAAGTACTGCACCGATGCTTGTCTGAAACGATATCTGGAAGCTCGAAATTGGAATGTCGACAAGTCCAAGAAGATGTTGAAAGACACACTCAAGTGGAGATCAGTCTATAAGCCTGAGGAAATCCGCTGGGATGAGGTTGCCGTGGAAGGAGAGACAGGGAAAATGTATAGAGCAGGTTTTCATGACAGACAAGGAAGGACTGTTCTTATTTTGAGACCTGGAATGCAGAATACTTCTTCAATAGACAATCAGATTAAGCATCTTGTGTATCTTTTGGAAAATGCTATGCTTAATCTTCCACCAGGGCAAGAACAAATGGCCTGGTTGATAGACTTCACTGGGTGGTCAATTACCAACAATGTTCCCCTCAAATCAGCCAGAGAGACCATCAGTATTCTACAGAATCATTATCCTGAGAGGCTTGCCATAGCATTCCTTTATAACCCTCCTCGAATTTTTGAAGCTTTTTGGAAGATAGTGAAGTATTTCTTGGATAACAAGACATTTCACAAGGTGAAATTTGTGTACCCTAAGAACAAAGACAGTGTGGAACTCATGAGGTCTTACTTCGACGACGAAAATCTTCCAAGTGAACTAGGCGGAAAAAGCATATTGAACTACAACCATGAGGAGTTTTCCAAAATAATGGCTCAGGATGATTTGAAATGTGCAGACTATTGGGGCACTGACGAAAAGCTAACAAACCACAGGCATTGTGCAGCAGAGGTAGCTCCAGAACCAGTTTGCAGTGAAACTCCAGCTACTTGA 882 0.424 MFNLWGGSQQDQQTKEAYAESKIKELKLAIGPLSGHSLKYCTDACLKRYLEARNWNVDKSKKMLKDTLKWRSVYKPEEIRWDEVAVEGETGKMYRAGFHDRQGRTVLILRPGMQNTSSIDNQIKHLVYLLENAMLNLPPGQEQMAWLIDFTGWSITNNVPLKSARETISILQNHYPERLAIAFLYNPPRIFEAFWKIVKYFLDNKTFHKVKFVYPKNKDSVELMRSYFDDENLPSELGGKSILNYNHEEFSKIMAQDDLKCADYWGTDEKLTNHRHCAAEVAPEPVCSETPAT 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01768 293 Gene3D - 6 276 IPR036865 -
Mepo4g01768 293 Pfam CRAL/TRIO domain 89 239 IPR001251 -
Mepo4g01768 293 SUPERFAMILY CRAL/TRIO N-terminal domain 18 83 IPR036273 -
Mepo4g01768 293 CDD SEC14 89 240 IPR001251 -
Mepo4g01768 293 SMART sec14_4 87 242 IPR001251 -
Mepo4g01768 293 Pfam CRAL/TRIO, N-terminal domain 40 66 IPR011074 -
Mepo4g01768 293 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 83 245 IPR001251 -
Mepo4g01768 293 SMART CRAL_TRIO_N_2 42 67 IPR011074 -
Mepo4g01768 293 FunFam Phosphatidylinositol transfer protein 3 3 274 - -
Mepo4g01768 293 SUPERFAMILY CRAL/TRIO domain 81 254 IPR036865 -
Mepo4g01768 293 PANTHER GH16843P 11 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01768 Mepo-Chr4 22977957 22981038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01768 46 234 Acyl Lipid Metabolism Gene Families AT1G55840 26.667 4.30e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01768 K26544 - gmx:100790867 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g01768 4 22977957 22981038 Mepo4g01768 4 22977957 22981038 ECH