Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01747 ATGTTCCTCTTATTAGGTAACTTAGCATCTGCTACGGTGTTTACCATACGCAACCAATGCAGTTACACCATTTGGCCTGGAACTCTTTCCGGCAACGGGGCTGCAATTCTCGGCCAAGGTGGTTTTTTGCTAGCCCCTGGTGCATCAGTTAGTTTAAACGCACCAGCGGGTTGGTCAGGACGCTTCTGGGCCCGGACTGGTTGCGAATTTGACGGTGCAGGCAATGGAAAATGTGTCACTGGAGATTGTCCCGGTGGACTAAATTGTATCGGAGGAGGTACTCCTCCGGTGACATTGGCAGAATTCACTATCGGATCAGCCGGTAATGGCGGCAAGGACTTCTACGACGTGAGCTTGGTCGACGGTTACAATGTAGGAATGGGTGTATGGGCTAGAGGAGGCACCGGTGATTGTCAATATGCGGGGTGTGTTGCGGACTTGAATGGTGGATGTCCGGCAGAGCTTAGGGTGAACAGTGCAGGTTCGGTGGTGGCGTGTAAGAGCGCGTGTTTGGCGTTCAATACGGAGGAATTTTGTTGCACCGGCCAACATGCCACGCCACAAACATGTTCGCCTACACATTATTCGGATATATTTAAGAAAGCTTGCCCAACTGCTTACAGTTATGCTTATGATGATGCTTCAAGCACTTGCACATGTTCTGGTTCCAATTACCATATCACGTTTTGCCCCAATGGATCATAA 705 0.4993 MFLLLGNLASATVFTIRNQCSYTIWPGTLSGNGAAILGQGGFLLAPGASVSLNAPAGWSGRFWARTGCEFDGAGNGKCVTGDCPGGLNCIGGGTPPVTLAEFTIGSAGNGGKDFYDVSLVDGYNVGMGVWARGGTGDCQYAGCVADLNGGCPAELRVNSAGSVVACKSACLAFNTEEFCCTGQHATPQTCSPTHYSDIFKKACPTAYSYAYDDASSTCTCSGSNYHITFCPNGS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01747 234 ProSitePatterns Thaumatin family signature. 74 89 IPR017949 -
Mepo4g01747 234 Gene3D Thaumatin 12 231 IPR037176 -
Mepo4g01747 234 PIRSF PR5 1 234 IPR001938 -
Mepo4g01747 234 ProSiteProfiles Thaumatin family profile. 11 233 IPR001938 -
Mepo4g01747 234 PANTHER OS03G0233200 PROTEIN 9 231 IPR001938 -
Mepo4g01747 234 SMART tha2 14 231 IPR001938 -
Mepo4g01747 234 CDD TLP-PA 13 230 - -
Mepo4g01747 234 PRINTS Pathogenesis-related protein signature 74 103 IPR001938 -
Mepo4g01747 234 PRINTS Pathogenesis-related protein signature 221 230 IPR001938 -
Mepo4g01747 234 PRINTS Pathogenesis-related protein signature 61 72 IPR001938 -
Mepo4g01747 234 PRINTS Pathogenesis-related protein signature 13 25 IPR001938 -
Mepo4g01747 234 SUPERFAMILY Osmotin, thaumatin-like protein 13 232 IPR037176 -
Mepo4g01747 234 FunFam Thaumatin-like protein 1a 12 231 - -
Mepo4g01747 234 Pfam Thaumatin family 18 231 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01747 Mepo-Chr4 22729317 22730111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01747 1 232 Receptor kinase-like Gene Family AT5G38280 46.721 1.46e-62 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01747 - - gmx:100809378 416.001