Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01718 ATGTTAGCGATATCTCCTCCTATGTTTTCAACAATTGGATGGCCCTTTGAAGAGCCAATAAGCCATAACCAGCATCAGAATCCATTCTACAAAGACACTGTTGATCAATTATTTCATTTTCATGATCAAGTTGAGGCAGAAATTAATTCAACAGATCCGTCACAATCCACAACCAGTGACCTTGGCATGGTCAAGAAGCTTGTTCATAATGCAAGTGAACGCGATCGCCGCAAGAAGATCAATAATTTGTATTCTTCACTTCGTTCACTTCTTCCTGTTTCAGATCAAATGAAGAAATTGAGTATTCCGGGAACAATTTCAAGAGTCTTAAAATACATACCAGAATTACAGAAACAGGTTGAAGGACTAATTAAGAGAAAAGATGAGATCTTACTGAGACTTTCCCCACAAGTAGATGAGGTGATCATCAACAAAGAATCTCAAAGGAAGAAACATAGTTACAACTCTGGTTTTATAGTTTCAACAAGTAGGCTTAATGATAGTGAAATTACCATTCAGATTTCATGTTACACTGTCCACAAGGTTCCACTTTCTGAGATCTTGATGTGTTTGGAAAATGATGGCCTTTTGCTGCTTAATGTTTCTTCATCAAAGACCTTTGGAGGGAGGGTCTTCCATAATTTGCATTTCCAGGTAGATGAAACACAGAGATTAGAACCCGATATTCTAAATGAGAAGCTCTTATCTATAATGGATAAGGAAGGGATATTTCAAGTTAACAAGAATTAG 750 0.368 MLAISPPMFSTIGWPFEEPISHNQHQNPFYKDTVDQLFHFHDQVEAEINSTDPSQSTTSDLGMVKKLVHNASERDRRKKINNLYSSLRSLLPVSDQMKKLSIPGTISRVLKYIPELQKQVEGLIKRKDEILLRLSPQVDEVIINKESQRKKHSYNSGFIVSTSRLNDSEITIQISCYTVHKVPLSEILMCLENDGLLLLNVSSSKTFGGRVFHNLHFQVDETQRLEPDILNEKLLSIMDKEGIFQVNKN 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01718 249 CDD bHLH_AtORG2_like 65 140 - -
Mepo4g01718 249 SMART finulus 70 122 IPR011598 GO:0046983
Mepo4g01718 249 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 65 133 IPR036638 GO:0046983
Mepo4g01718 249 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 64 116 IPR011598 GO:0046983
Mepo4g01718 249 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 55 236 - -
Mepo4g01718 249 FunFam Transcription factor ORG2 60 145 - -
Mepo4g01718 249 Pfam Helix-loop-helix DNA-binding domain 65 117 IPR011598 GO:0046983
Mepo4g01718 249 Gene3D - 59 153 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01718 Mepo-Chr4 22492916 22494664 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01718 1 240 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 42.169 3.49e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo4g01718 HLH 5.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01718 - - gmx:100803424 272.322