Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01717 ATGTCGAATAATTTAAAGACGTACGATGAGAATGGTGATAGGTGTGTGATGTTGTTTGGTGTGAACATCGCAAAAAATCCTATCACAGATGATGACACCATGAACGAGAGTTTTAGTCTTGAAAACTTCAATCATAGCCCTGATGAGTATGAAAACGAAAATCAAGAATTTGATACTGGTCAAAGTTCCAACCATGAACACATCAAAAAGGGTGGAACTAGTTTCTTTGTTGGAACCTGTAGAGTGAAACCATGGACAAGAACGGAGCACCAGGCTTTCTTGAAAGGTTTAGAGGCTGTTGGAAAAGGCAAATGGAAGCGTATATCAAAGGATTTTGTGGTGACAAAGACTCCTACTCAGGTTGCTAGTCATGCACAAAAGCATTTTAATTACAGACGTGGTGCATATAATAACAAAAATCGTACAAGCGTCTTTGACATGAAACTTGAAGAAAATGAAAATTCAAAAGCTACTGGTACTTCTTCTGTATAG 492 0.378 MSNNLKTYDENGDRCVMLFGVNIAKNPITDDDTMNESFSLENFNHSPDEYENENQEFDTGQSSNHEHIKKGGTSFFVGTCRVKPWTRTEHQAFLKGLEAVGKGKWKRISKDFVVTKTPTQVASHAQKHFNYRRGAYNNKNRTSVFDMKLEENENSKATGTSSV 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01717 163 MobiDBLite consensus disorder prediction 49 70 - -
Mepo4g01717 163 PANTHER TRANSCRIPTION FACTOR KUA1 11 154 - -
Mepo4g01717 163 Pfam Myb-like DNA-binding domain 83 128 IPR001005 -
Mepo4g01717 163 ProSiteProfiles Myb-like domain profile. 84 129 IPR001005 -
Mepo4g01717 163 SMART sant 81 131 IPR001005 -
Mepo4g01717 163 CDD SANT 84 129 IPR001005 -
Mepo4g01717 163 NCBIfam myb-like DNA-binding domain, SHAQKYF class 84 130 IPR006447 GO:0003677
Mepo4g01717 163 SUPERFAMILY Homeodomain-like 84 133 IPR009057 -
Mepo4g01717 163 Gene3D - 83 133 - -
Mepo4g01717 163 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 133 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01717 Mepo-Chr4 22480615 22484086 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo4g01717 Myb_DNA-binding 2.6e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01717 - - mtr:25483182 223.402