Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01712 ATGGAACAAAGCTTAGAATCCAGCTTCAGTTTTTGGACCTCAAACAACCTAGAAATTCAAACCTCTTTCTCCAAACCTCCAAGATCATCCTCAAACCTAAGCAACCGCAAACCCTCCTTGAACATCACAATCCCTTCCACAACCAAACCTCTCCCACAACAAAACATGGTAAAAAGTGAAAACACCAACACCAAAGAGGATAATAAGCACTATAGAGGTGTTAGAAGAAGAACATGGGGAAAATTTGCTGCAGAAATCCGTGACCCTAATAGAAAAGGATCAAGAGTATGGCTTGGAACCTTTGATACAGCTATGGAAGCTGCAAAAGCTTATGATAAAGCTGCTTTTCAGATGAGAGGAAGTAAGGCCATATTGAACTTCCCTCTAGATGTTGCTACTGATTCTGTAGAATCATCACTTTCTAACTGCATCAAAGTTGGTAAGAAAAGACAAAGAGATGAAGGAAACAGTGTTGAGATTAATAATAATATTAAGCAAGTTAAGAAAGAAGAAGGGGTTTCAGCAGCTCCTTTGACTCCTTCATGTTGGAAAGGGTTTTGGGATACTGATGTTATGGGAACTATCTTCAGTGTTCCTCCTTTGTCACCCTTATCTCCACTCATGGGATTTTGA 633 0.3965 MEQSLESSFSFWTSNNLEIQTSFSKPPRSSSNLSNRKPSLNITIPSTTKPLPQQNMVKSENTNTKEDNKHYRGVRRRTWGKFAAEIRDPNRKGSRVWLGTFDTAMEAAKAYDKAAFQMRGSKAILNFPLDVATDSVESSLSNCIKVGKKRQRDEGNSVEINNNIKQVKKEEGVSAAPLTPSCWKGFWDTDVMGTIFSVPPLSPLSPLMGF 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01712 210 Gene3D AP2/ERF domain 69 130 IPR036955 GO:0003700|GO:0006355
Mepo4g01712 210 ProSiteProfiles AP2/ERF domain profile. 70 128 IPR001471 GO:0003700|GO:0006355
Mepo4g01712 210 PRINTS Ethylene responsive element binding protein signature 94 110 IPR001471 GO:0003700|GO:0006355
Mepo4g01712 210 PRINTS Ethylene responsive element binding protein signature 71 82 IPR001471 GO:0003700|GO:0006355
Mepo4g01712 210 PANTHER DNA-BINDING DOMAIN 34 151 IPR044808 GO:0003700|GO:0009873
Mepo4g01712 210 SUPERFAMILY DNA-binding domain 70 130 IPR016177 GO:0003677
Mepo4g01712 210 CDD AP2 69 128 IPR001471 GO:0003700|GO:0006355
Mepo4g01712 210 SMART rav1_2 70 134 IPR001471 GO:0003700|GO:0006355
Mepo4g01712 210 MobiDBLite consensus disorder prediction 21 61 - -
Mepo4g01712 210 MobiDBLite consensus disorder prediction 21 70 - -
Mepo4g01712 210 FunFam Ethylene-responsive transcription factor 2 69 129 - -
Mepo4g01712 210 Pfam AP2 domain 70 120 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01712 Mepo-Chr4 22425990 22427081 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01712 29 209 AP2-EREBP Transcription Factor Family AT5G51190 53.968 2.75e-56 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo4g01712 AP2 1.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01712 K09286 - tpra:123891695 240.35