Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01711 ATGACAACAACAAAAGAAACTTCAAACTTAGATCTCATACGCCATCATCTCTTAGGTGACAACATCTCTGACCCGTTTCTCCATCCTGTTAAACTTGAAAACCCTTCACCAGAATTTGATTTCTCTTCATATATTTCAGAAAACAGTACCTTCTTCACTTTCCTTGAAAACTATGATTTAATAGCTGACATGGAATTCTTTACTCACACTTCATCTTCAAAGGAAACAACCCCTTCAAAGGAAATCAAAGATGAAGTAGCAATAGCAACTACTATGGTGGGGTCATCAAAGAAGGTTAAGAAAGAAGAAGAATGTGTTGATGAGACAAGAAGATATAGAGGTGTAAGGAGAAGGCCATGGGGGAAATTTGCAGCTGAGATACGTGATCCATCAAGGAAAGGAAGTAGGGTTTGGTTAGGTACATTTGATTGTGAAATTGATGCTGCAAAAGCTTATGATTCTGCTGCTTTCAGAATGAGGGGTCAGAAAGCTATATTGAATTTTCCTTTGGAAGCTGGAGTTTGTGATCCTAAGCCAAATAGTTGTGGTAGGAAAAGGAGAAGAGAAAGTGAAATTGAAGGTACAAGATCTTCAAGTTCAAGTTCATAG 609 0.3777 MTTTKETSNLDLIRHHLLGDNISDPFLHPVKLENPSPEFDFSSYISENSTFFTFLENYDLIADMEFFTHTSSSKETTPSKEIKDEVAIATTMVGSSKKVKKEEECVDETRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDCEIDAAKAYDSAAFRMRGQKAILNFPLEAGVCDPKPNSCGRKRRRESEIEGTRSSSSSS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01711 202 Pfam AP2 domain 111 161 IPR001471 GO:0003700|GO:0006355
Mepo4g01711 202 MobiDBLite consensus disorder prediction 180 194 - -
Mepo4g01711 202 CDD AP2 119 169 IPR001471 GO:0003700|GO:0006355
Mepo4g01711 202 SMART rav1_2 111 175 IPR001471 GO:0003700|GO:0006355
Mepo4g01711 202 SUPERFAMILY DNA-binding domain 111 171 IPR016177 GO:0003677
Mepo4g01711 202 FunFam Ethylene-responsive transcription factor 2 110 171 - -
Mepo4g01711 202 PRINTS Ethylene responsive element binding protein signature 112 123 IPR001471 GO:0003700|GO:0006355
Mepo4g01711 202 PRINTS Ethylene responsive element binding protein signature 151 171 IPR001471 GO:0003700|GO:0006355
Mepo4g01711 202 MobiDBLite consensus disorder prediction 176 202 - -
Mepo4g01711 202 ProSiteProfiles AP2/ERF domain profile. 111 169 IPR001471 GO:0003700|GO:0006355
Mepo4g01711 202 Gene3D AP2/ERF domain 110 171 IPR036955 GO:0003700|GO:0006355
Mepo4g01711 202 PANTHER DNA-BINDING DOMAIN 80 188 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01711 Mepo-Chr4 22416629 22417818 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01711 1 188 AP2-EREBP Transcription Factor Family AT5G07580 42.512 7.63e-40 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mepo4g01711 AP2 4.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01711 - - ccaj:109813158 245.358