Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01666 ATGTCTAGGAACATCAAGGAGGTGAGAGTTTTGGCAAAAGGGTATTATGTTATTTTATTGCTATTGACTTTATTCCTTTTTAGCACAGAGGGGTTGAATTTAGAGGGACAAATCCTCTTGGAAATTAAGAATGGACTTCATGATAAAGAGAATTATTTGTCAAATTGGAATTCTAGTGATGAAAATCCATGTGGATGGATAGGTGTAAATTGCACTTATGAATATAAAAGTGGAAAAGGTAGTGATACAGTGGTTACTTCTCTTAATTTGAGTTCTATGAATCTTTCTGGGACCCTAAATGCTAGCATTGGAGGTCTAACCAATTTAACTTATCTCAATCTTGCTTACAATGGTTTGAATGGAAGTATCCCTAAGGAGATTGGTGAGTGTTCGAGTTTGGAATATCTTTACTTGAACAATAATCAATTTGAAGGACCAATTCCTGTTGAATTAGGGAAACTGTCTGCTTTGAGATATTTGAATATTTGCAACAATATACTCTCTGGTGTTCTTCCGGACGAGATTGGAAAGTTGACTTCATTGGTTGAGTTGGTTGCTTTTAGTAACTATCTCATTGGTCCTTTGCCGAGTTCCATTGGAAATCTTGAGAATCTTGTGACTTTCAGAGCCGGGGCGAATAACATTACTGGTAGCTTGCCGAAGGAGATTAGCCGATGTAAGAGCTTGGAACGTCTTGGTCTTGCTCAAAATCAGATAGTTGGTGAGATACCGAACGAGATTGGGCTGCTCGAAAACTTAAAAGAGTTGATTTTATGGGAAAATGAGTTTTCAGGAGTTGTTCCTAAAGAGCTTGGCAATTGTAGCAGGCTTGAGATCCTGGCGTTATACGGGAATAATCTCATCGGACCATTACCTGGAGAGATCGGGAACCTGAAATCGTTGAAGTGGTTGTATCTTTATAGAAATAATTTGAATGGATCCATTCCAAGGGAAATTGGAAATCTTTCTTCAGCTTTACAGATTGATTTCTCGGAGAACTCTTTAGGTGGCGATATCCCTTCGGAGTTTGGCAAAATTCGTGGTCTAAGCTTGCTCTTTCTCTTTGAGAACCATCTAAGTGGTGTTATACCGAATGAGTTTGGTAGTTTGAAGAACCTGTCGAAGCTGGACCTGTCGATAAATAATCTTACTGGTCCGATTCCGCACCGCTTGCAATATTTGACAAATATGATTCAGCTGCAACTTTTTGACAACTCCTTAACTGGTATTATTCCTCAGGGACTTGGACTCTTTAGTCGTCTTTGGGTAGTTGATTTTTCTGACAACAACTTGACCGGAACAATACCTCCTCATTTATGCCGAAACTCTCGTTTGATGCTGTTGAATGTAGCAGATAATCAGCTTTACGGAAACATACCGAAAGGGATATTGAACTGTGAATCACTGGCACAGTTGCTGTTGGTCGGTAACAGGCTTACCGGTGGCTTCCCTTCCGAGTTGTGTAAACTTGAGAACCTTACTGCCATTGATTTGAATGATAACAGGTTTAGCGGTCCACTTCCTCGTGAGATCTCAAACTGCCGCAATTTGCAAAGGCTTCATATTGCAAACAATTACTTCACATTGGAGTTGCCTAAGGAAATAGGAAATCTATCTCAATTGGTAACTTTTAATGTTTCATCAAACCTTTTCACCAGAAGAATCCCCACTGAAATTGTTTGGTGCCAGAGACTGCAGCGCCTAGATCTCAGCAGGAATCGTTTTACCGGTTCTTTGCCAAATGAACTCGGAACACTTCAGCACTTGGAGATTCTAAAACTCTCAGACAATCAGTTGTCTGGAAATATTCCTGCAGCATTAGGCAATCTGTCTCATTTGAACTGGTTGCTGATGGACGGCAATTTGTTTTTTGGCGAAATACCTTCTCAGTTAGGATCTCTTTCGAGCTTACAGATAGCAATGGATCTTAGTTACAATAATCTTTCTGGAAGAATACCGTCTCGGCTCGGCAATCTCAATATGCTTGAGTATCTCTTTCTCAATAACAACCAATTGGATGGTGAAATTCCGAGTACCTTTAGCGCACTTTCTAGCTTGATGGGGTGTAATTTCTCAAACAATAACCTCTCTGGACCAATTCCTTCCACTAAAATTTTCGAAAGTATGGCTGTTAGCAGCTTTGTTGGAGGTAACATAGGTCTTTGCGGTACACCTCTCGGTGACTGCAATAGAATTTCAGCTCCTTGCTCTACTCATCCGGTGAAAGATGCTAATCTTCCCCGTGCTAAAATTGTCATAATCATTGCAGCTACTGTTGGTGGTGTTTCTCTCATTTTGATTTTAGTGATTCTATATTTAATGAGACGACCTCGGGAGGCTGTTGATTCCTTTGCAGAAACTGAAACTCCATCCATAGATTCAGATATCTATTTGCCTCCAAAGGAAGGTTTCACATTTCAAGACCTAGTTGAAGCTACAAAAAGATTTCATGAAAGTTATGTTATAGGTAGTGGAGCGTGCGGCACAGTTTATAAGGCTGTAATGAAATCTGGTAAGACGATTGCCGTTAAGAAGTTAGCGTCGAACCGGGAAGGGAACAATGTCGATAATAGTTTCAGGGCTGAAATATCGACTCTAGGAAGGATAAGGCATCGGAATATAGTGAAGCTGTACGGCTTTTGCTATCACCAGGGTTCAAATCTCCTACTTTATGAGTACATGGAAAGAGGTAGCTTAGGTGAATTATTGCATGGTTCTGCAAGTAATTTGGAGTGGCCGACTCGATTCATGATTGCTCTTGGAGCTGCTGAAGGTCTTTCTTACTTGCATCATGACTGTAAACCAAAGATCATTCACCGAGACATAAAATCTAACAACATTCTTCTTGATGAAAATTTCGAGGCCCATGTTGGTGATTTTGGATTGGCTAAAGTGATTGACATGCCTCAGTCAAAATCGATGTCTGCAGTTGCAGGATCTTATGGGTATATTGCTCCTGAATATGCATATACCATGAAGGTTACAGAGAAGTGCGACATATACAGTTACGGTGTTGTACTCTTGGAATTGCTAACCGGAAAAACTCCAGTTCAACCAATGGAGCAAGGGGGAGATCTTGTCACATGGACGAGAAACCATATTCGAAACCATAACAATACACTGAGCTCAGAGATACTCGACACTCGTCTTGATCTTGAAGACCAAATCACGATAAATCACATGCTGACTGTTTTGAAACTTGCTCTAATGTGCACAAGTATGTCTCCTACTAAGAGGCCATCAATGCGCGATGTTGTGTTGATGCTCATTGAGTCAAATGAACGAGAAGGAAACTTAACACTCACTCGAACAAACCACGACGGTCCTCATTTTAAAGATAGCACATGA 3348 0.4047 MSRNIKEVRVLAKGYYVILLLLTLFLFSTEGLNLEGQILLEIKNGLHDKENYLSNWNSSDENPCGWIGVNCTYEYKSGKGSDTVVTSLNLSSMNLSGTLNASIGGLTNLTYLNLAYNGLNGSIPKEIGECSSLEYLYLNNNQFEGPIPVELGKLSALRYLNICNNILSGVLPDEIGKLTSLVELVAFSNYLIGPLPSSIGNLENLVTFRAGANNITGSLPKEISRCKSLERLGLAQNQIVGEIPNEIGLLENLKELILWENEFSGVVPKELGNCSRLEILALYGNNLIGPLPGEIGNLKSLKWLYLYRNNLNGSIPREIGNLSSALQIDFSENSLGGDIPSEFGKIRGLSLLFLFENHLSGVIPNEFGSLKNLSKLDLSINNLTGPIPHRLQYLTNMIQLQLFDNSLTGIIPQGLGLFSRLWVVDFSDNNLTGTIPPHLCRNSRLMLLNVADNQLYGNIPKGILNCESLAQLLLVGNRLTGGFPSELCKLENLTAIDLNDNRFSGPLPREISNCRNLQRLHIANNYFTLELPKEIGNLSQLVTFNVSSNLFTRRIPTEIVWCQRLQRLDLSRNRFTGSLPNELGTLQHLEILKLSDNQLSGNIPAALGNLSHLNWLLMDGNLFFGEIPSQLGSLSSLQIAMDLSYNNLSGRIPSRLGNLNMLEYLFLNNNQLDGEIPSTFSALSSLMGCNFSNNNLSGPIPSTKIFESMAVSSFVGGNIGLCGTPLGDCNRISAPCSTHPVKDANLPRAKIVIIIAATVGGVSLILILVILYLMRRPREAVDSFAETETPSIDSDIYLPPKEGFTFQDLVEATKRFHESYVIGSGACGTVYKAVMKSGKTIAVKKLASNREGNNVDNSFRAEISTLGRIRHRNIVKLYGFCYHQGSNLLLYEYMERGSLGELLHGSASNLEWPTRFMIALGAAEGLSYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGKTPVQPMEQGGDLVTWTRNHIRNHNNTLSSEILDTRLDLEDQITINHMLTVLKLALMCTSMSPTKRPSMRDVVLMLIESNEREGNLTLTRTNHDGPHFKDST 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01666 1115 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 894 1106 - -
Mepo4g01666 1115 SUPERFAMILY Protein kinase-like (PK-like) 794 1089 IPR011009 -
Mepo4g01666 1115 Pfam Leucine Rich Repeat 157 178 IPR001611 GO:0005515
Mepo4g01666 1115 Pfam Leucine rich repeat 252 311 IPR001611 GO:0005515
Mepo4g01666 1115 Pfam Leucine rich repeat 564 622 IPR001611 GO:0005515
Mepo4g01666 1115 Pfam Leucine rich repeat 85 143 IPR001611 GO:0005515
Mepo4g01666 1115 Pfam Leucine rich repeat N-terminal domain 34 71 IPR013210 -
Mepo4g01666 1115 Gene3D Ribonuclease Inhibitor 398 734 IPR032675 -
Mepo4g01666 1115 Gene3D Ribonuclease Inhibitor 297 397 IPR032675 -
Mepo4g01666 1115 Gene3D Ribonuclease Inhibitor 31 188 IPR032675 -
Mepo4g01666 1115 Gene3D Phosphorylase Kinase; domain 1 782 893 - -
Mepo4g01666 1115 SMART serkin_6 816 1089 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01666 1115 Gene3D Ribonuclease Inhibitor 189 294 IPR032675 -
Mepo4g01666 1115 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 781 893 - -
Mepo4g01666 1115 ProSitePatterns Serine/Threonine protein kinases active-site signature. 937 949 IPR008271 GO:0004672|GO:0006468
Mepo4g01666 1115 SUPERFAMILY RNI-like 328 702 - -
Mepo4g01666 1115 Gene3D Transferase(Phosphotransferase) domain 1 894 1107 - -
Mepo4g01666 1115 SUPERFAMILY L domain-like 36 335 - -
Mepo4g01666 1115 ProSiteProfiles Protein kinase domain profile. 816 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01666 1115 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 490 1090 - -
Mepo4g01666 1115 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 31 195 - -
Mepo4g01666 1115 SMART LRR_typ_2 538 562 IPR003591 -
Mepo4g01666 1115 SMART LRR_typ_2 659 682 IPR003591 -
Mepo4g01666 1115 SMART LRR_typ_2 250 273 IPR003591 -
Mepo4g01666 1115 SMART LRR_typ_2 298 322 IPR003591 -
Mepo4g01666 1115 SMART LRR_typ_2 106 130 IPR003591 -
Mepo4g01666 1115 SMART LRR_typ_2 586 610 IPR003591 -
Mepo4g01666 1115 SMART LRR_typ_2 418 442 IPR003591 -
Mepo4g01666 1115 SMART LRR_typ_2 490 514 IPR003591 -
Mepo4g01666 1115 Pfam Protein kinase domain 817 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01666 1115 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 196 289 - -
Mepo4g01666 1115 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 418 733 - -
Mepo4g01666 1115 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 290 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01666 Mepo-Chr4 21912067 21916880 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01666 54 1089 Receptor kinase-like Gene Family AT1G73080 37.581 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo4g01666 Pkinase 2.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01666 - - gmx:100807838 1744.17