Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01662 ATGGATCTGGATCTTGTTATAGATGGAAAATTCAAGCTTCTGAAGAAACTTGGGAGTGGAGGATTTGGCGAGGTTTATTTGGGTGTTGATGTGCAAACTCAAGAGAAACTGGCTGTTAAAGTGATAAGGATATTGGAGTATATACACTCCAATGGTGTTCTGCATCGGGATATAAAGCCTGAAAATATTCTAATGGGTTTAGGCCGCAATGCAAATAAGATATACATAATTGATTATAGCCTTGGGAGGAAGTATCGTGATCTTCACACAAATGAGCATATACCGTATAGGGAAAACAAGAATTTCATTGGAACTGCTAGATATGCAAGTGTTAACACACTCCTAGGATTTGAACAAGGAAGAAGAGAGGATCTTGAATCACTTGGTTACGTACTTATGTACTTTTTAAGAGGAAGTCTTCCATGGCAAGGCATGAAAGATGAAAATAAAAAGAAGCGATATGACATGATAAGGGAAATGAAGATGCTTACTCGAATAGAGCCTCCAGATATAGCAGATGCACGGTTCAGCTCTGCTGTTACAGCAGCCAGGCAGGCCGAGGATTTGGCTAGTAACACAGTACCGCAGCATCACATGATAGGCAGCTGCCCAAGGAACTCTCAGCCGCTGAATTTGGGCCATGTGTGA 648 0.4136 MDLDLVIDGKFKLLKKLGSGGFGEVYLGVDVQTQEKLAVKVIRILEYIHSNGVLHRDIKPENILMGLGRNANKIYIIDYSLGRKYRDLHTNEHIPYRENKNFIGTARYASVNTLLGFEQGRREDLESLGYVLMYFLRGSLPWQGMKDENKKKRYDMIREMKMLTRIEPPDIADARFSSAVTAARQAEDLASNTVPQHHMIGSCPRNSQPLNLGHV 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01662 215 Pfam Protein kinase domain 42 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01662 215 SMART serkin_6 11 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01662 215 ProSiteProfiles Protein kinase domain profile. 1 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01662 215 ProSitePatterns Serine/Threonine protein kinases active-site signature. 53 65 IPR008271 GO:0004672|GO:0006468
Mepo4g01662 215 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Mepo4g01662 215 Gene3D Transferase(Phosphotransferase) domain 1 30 203 - -
Mepo4g01662 215 MobiDBLite consensus disorder prediction 196 215 - -
Mepo4g01662 215 SUPERFAMILY Protein kinase-like (PK-like) 6 167 IPR011009 -
Mepo4g01662 215 PANTHER CASEIN KINASE-RELATED 32 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01662 Mepo-Chr4 21833969 21840345 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01662 28 145 MAP Kinase Kinase Kinase AT1G62400 30.508 5.67e-10 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mepo4g01662 Pkinase 1.7e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01662 K08960 - pop:7475395 201.83