Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01660 ATGGAGTTTTCTTCTTCAAAATGGGTTTTCAATGTTTGTTTCTTCTTGTTGCTTTTTGTGTTCATTGTTCATGATGAAGCTATGGCTTCATCACAGATCTCTCAGTTTAGCAATGTTGAAACTGAGATACATAGGTTACCAAGCTTTAACGATTCATCAATGGCGGCAAGGGAAAAACAAGCTGAGAAATTGAATGAACGTGCTGCTGTGGCTAATCCAAAAGAGGTGGCTTCTATGGTTGAGATGCACATCCAGAACAGCACTGAAAGAAGGAATCTTGGATTTTTCTCCTGTGGAACCGGTAACCCTATTGACGATTGCTGGCGTTGTGACCGTAATTGGCAACAAAACAGGAAGCGTCTAGCAGACTGTGGTATTGGTTTTGGTAGAAACGCCATTGGTGGTCGCGACGGAAAGTACTATGTTGTCACTGACCCAAGAGATGATGACCCTGTTAACCCTAGGCCAGGAACTTTGCGCCACGCCGTCATCCAAGATAGACCACTTTGGATTGTGTTCAAGAGAGACATGGTTATTCAGTTTAAACAAGAGCTTATTGTGAACAGTTTCAAGACCATTGATGGAAGAGGAGCTAATGTGCATATTGCTAATGGAGGGTGCATTACTATTCAGTATGTTACTAATGTTATCATTCATGGTCTTCATATTCATGATTGTAAACCAACTGGTAATGCTATGGTGAGAAGCTCAGAAACACATTTTGGTTGGAGGACTATGGCTGATGGTGATGCTGTTTCTATATTTGGTTCAAGTCATATTTGGGTTGATCATAATTCTCTTTCTCATTGTGCTGATGGTCTTGTTGATGCTGTCATGGGCTCAACAGCTATAACAATCTCTAACAACCACTTCACCCACCACAATGAGGTGATTCTGTTGGGACACAGTGACTCCTACACAAGAGACAAGCAGATGCAAGTGACCATAGCTTATAACCATTTTGGAGAGGGTCTTATTCAGAGAATGCCACGGTGTAGACATGGTTATTTCCATGTGGTGAACAATGACTACACTCACTGGGAAATGTATGCTATTGGTGGAAGTGCTGACCCCACAATCAACAGCCAGGGTAACAGATACAATGCTCCCACTAACCCTTTTGCCAAAGAGGTTACTAAGAGAGTGGAAACAGCTGAAACTCAGTGGAAAGGTTGGAATTGGAGATCAGAGGGAGACTTATATCTAAATGGTGCATATTTCACAGCATCTGGTGCTGGAGCTTCAGCTAGCTATGCAAGAGCCTCTAGCTTAGGAGCAAAATCTTCTGCTATGGTTGGTACCATGACTTCAAATGCTGGTGCACTAGGCTGCAAAAGAGGCCGTCAGTGCTAA 1353 0.4279 MEFSSSKWVFNVCFFLLLFVFIVHDEAMASSQISQFSNVETEIHRLPSFNDSSMAAREKQAEKLNERAAVANPKEVASMVEMHIQNSTERRNLGFFSCGTGNPIDDCWRCDRNWQQNRKRLADCGIGFGRNAIGGRDGKYYVVTDPRDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVIQFKQELIVNSFKTIDGRGANVHIANGGCITIQYVTNVIIHGLHIHDCKPTGNAMVRSSETHFGWRTMADGDAVSIFGSSHIWVDHNSLSHCADGLVDAVMGSTAITISNNHFTHHNEVILLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTINSQGNRYNAPTNPFAKEVTKRVETAETQWKGWNWRSEGDLYLNGAYFTASGAGASASYARASSLGAKSSAMVGTMTSNAGALGCKRGRQC 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01660 450 Gene3D - 101 443 IPR012334 -
Mepo4g01660 450 SMART amb_all 176 373 IPR002022 -
Mepo4g01660 450 PRINTS Pollen allergen Amb family signature 328 347 IPR018082 -
Mepo4g01660 450 PRINTS Pollen allergen Amb family signature 184 200 IPR018082 -
Mepo4g01660 450 PRINTS Pollen allergen Amb family signature 421 444 IPR018082 -
Mepo4g01660 450 PRINTS Pollen allergen Amb family signature 248 269 IPR018082 -
Mepo4g01660 450 PRINTS Pollen allergen Amb family signature 148 173 IPR018082 -
Mepo4g01660 450 PRINTS Pollen allergen Amb family signature 350 369 IPR018082 -
Mepo4g01660 450 PRINTS Pollen allergen Amb family signature 392 416 IPR018082 -
Mepo4g01660 450 PRINTS Pollen allergen Amb family signature 124 141 IPR018082 -
Mepo4g01660 450 FunFam Pectate lyase 101 443 - -
Mepo4g01660 450 PANTHER PECTATE LYASE 18-RELATED 69 448 IPR045032 GO:0030570
Mepo4g01660 450 SUPERFAMILY Pectin lyase-like 78 444 IPR011050 -
Mepo4g01660 450 Pfam Pectate lyase 182 365 IPR002022 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01660 Mepo-Chr4 21792011 21797413 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01660 31 450 Polysaccharide Lyase AT4G13710 78.118 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01660 K01728 - gmx:100808253 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g01660 4 21792011 21797413 Mepo4g01660 4 21792011 21797413 ECH