Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01655 ATGGCAGAAGATATGGAAATTGATCATATTATCGACGTTCCTGATACCCCAGATAGATCAAATGCTGGAAACAATGATCGAAAATGTGTAGGTAATCCGGAGAAGAGGGGGAGGGCTTTTCCTGTCGCTAATGAAATAAGTAAATGCAACAACTATATAATAATATCCCCGGATAAACCTTCTCCCTCCCAAAATGCCTCCATATTTAGGAGAACCCAAACTGGGAAAGTTTCTGGACTTGGAACACCACGCTCTAGTAAAGCTGAAATGATGGAGAAAGGGAAAACTGTAAGCTCAAAGATTCCTTCTAAGTCGTCTCACCATGGTCATATTTCTGTTTTCGATTTGACCGGAGAGAATGGGCAATTCCAACAACCAAAACCAGCTTTCTCACACTGTGGATCAAGAGATAACACAAATGAAGACAAGAAAGAATTGAAAGCAAGTATTGGGAATTCTTCGCTACCCTTAATCTCTAATTCATCTAATACATCTAGAAGTGCTGTCACTGGAAAGTTTAAACTAGATAACACAACACTTCCAGGTTCTAATACTTTTATGGACCGTGGCAAGAGTGTTTCTCTGTCTAATGATTCTCAATCTCAGCTGAAAGCTGAAAAGCCTGTTTCTTTGCTTCCTCGTCTTTCCACTGCTCCAAGAGTCAGAGGGAACAAGAGATTGGTAAGAAATGGGTGCATTTCACCACAAAATATTGCAACTAGGGCAAAACAATCAGCTGAACAGAGCATCTTTCAAACAAATAATGTTGAACAGATCCGTGCTGGGCATTCAGTTTCTCGCAATACAACGTCTCCAATTAGTGTTGATGATATTGTTGCTGAAGAGAGACATGGTGGTAGATTGAAAGGAAAGGGAGTACTTATTCATCCTTCATCACATGGAACTATTCACACCGATAGCAGCCCTGTGGTCAATCATGAAGAGGCCAGTGGTAGCAGTAATATACCAAGAAATGGATATGAAAACTGGGAGAGACAAGGTGGTTGGAGAACTACACATAATGATCAACACTTGTATGATGTGAATGGGCATCATTCAAGGAGAAGTTACGTTGAAAGATTTACTCACAGACAAAATATGAACAGACTGGACAGAAGTGATACTGGGAGCAGTCAAAATGGCAAGGATGTTCCAGCTTCACTGATTATTCCACAGGTAGGTCAGTCAACTGGACCTAGTACTACTGCTGACTCAGCGACTAAAAGGCCAAGGAAACGTGAATCATCTTCTAGAAATCCTAATGTAGCATCTCATAATTCTAAAACTGTATTCGCCAATTCATCTGGGGAATCATCAAGTTCATCCAGAAGCCGTGACATGGATCCTGAATTAGCTGCGTTGTTATCCGTACCAAGTTTCAACAACGAACTTAATGAAGGTTTACATGACAATGACAACAATATTTCGGTTGCTCGGGCAATGCAATTGGAAGCAGATGAGAGATTGGCACGTGAACTCCAAGAACAACTATATAATGATGACTATTCCGAAGGCAGTTGGATTGATGAACATTTAGCACGGGAGCTGCAGGGTGCAGGCGATCTTTTGCACACATCTACTGATAATCATCAGATACCTCATCCTACACGGATTCCGGGGGAAAATAGACAGCCCCGTTCACGGCCTCATCAAAATCCTTCAAATAGGAGGAGAACTGTGCCTCAAGTTCCTCTTTCTAATAGAACGACACAGTTGAGTCGCATGACAACTCGATCGTCAAGGCCTATCGTATCATCTAGAGGAAGAGGAAGAGGAAGAGGACGAGCAAGACTCCCTCGGTTTCCTCTAGAGATGGACCTAGACATGAGACTTGATATATTGGAAGCATTAGAGAATGCGGTAGGGGATTTTAATGATCTGGGAATGCCTGATGACATCCTTAATGCTCATCGTGATTTCAATGAAGATGATTATGAAATGTTATTGGCTCTTGATGATCATAATCACCAGCATACTGGTGCATCTACCAATCTGATCAATAGGTTGCCACAGTCCACTGTCCAGACTGACAACTACACAGAGGATTGTGCCGTATGTCTTGAGACCCCTGTCAAGGGGGACATTATTCGCCACCTTCCTTGTTTGCATAAATTTCACAAAGATTGTATTGATCCTTGGCTTGGTAGGAAAAGTTCATGCCCGGTGTGCAAGTCATCTATCACCTGA 2187 0.4207 MAEDMEIDHIIDVPDTPDRSNAGNNDRKCVGNPEKRGRAFPVANEISKCNNYIIISPDKPSPSQNASIFRRTQTGKVSGLGTPRSSKAEMMEKGKTVSSKIPSKSSHHGHISVFDLTGENGQFQQPKPAFSHCGSRDNTNEDKKELKASIGNSSLPLISNSSNTSRSAVTGKFKLDNTTLPGSNTFMDRGKSVSLSNDSQSQLKAEKPVSLLPRLSTAPRVRGNKRLVRNGCISPQNIATRAKQSAEQSIFQTNNVEQIRAGHSVSRNTTSPISVDDIVAEERHGGRLKGKGVLIHPSSHGTIHTDSSPVVNHEEASGSSNIPRNGYENWERQGGWRTTHNDQHLYDVNGHHSRRSYVERFTHRQNMNRLDRSDTGSSQNGKDVPASLIIPQVGQSTGPSTTADSATKRPRKRESSSRNPNVASHNSKTVFANSSGESSSSSRSRDMDPELAALLSVPSFNNELNEGLHDNDNNISVARAMQLEADERLARELQEQLYNDDYSEGSWIDEHLARELQGAGDLLHTSTDNHQIPHPTRIPGENRQPRSRPHQNPSNRRRTVPQVPLSNRTTQLSRMTTRSSRPIVSSRGRGRGRGRARLPRFPLEMDLDMRLDILEALENAVGDFNDLGMPDDILNAHRDFNEDDYEMLLALDDHNHQHTGASTNLINRLPQSTVQTDNYTEDCAVCLETPVKGDIIRHLPCLHKFHKDCIDPWLGRKSSCPVCKSSIT 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01655 728 SMART ring_2 683 723 IPR001841 -
Mepo4g01655 728 MobiDBLite consensus disorder prediction 1 15 - -
Mepo4g01655 728 MobiDBLite consensus disorder prediction 545 584 - -
Mepo4g01655 728 ProSiteProfiles Zinc finger RING-type profile. 683 724 IPR001841 -
Mepo4g01655 728 MobiDBLite consensus disorder prediction 523 596 - -
Mepo4g01655 728 MobiDBLite consensus disorder prediction 361 447 - -
Mepo4g01655 728 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 649 728 IPR013083 -
Mepo4g01655 728 MobiDBLite consensus disorder prediction 300 326 - -
Mepo4g01655 728 CDD RING-H2_PA-TM-RING 682 724 - -
Mepo4g01655 728 MobiDBLite consensus disorder prediction 181 207 - -
Mepo4g01655 728 Pfam Ring finger domain 682 724 IPR001841 -
Mepo4g01655 728 MobiDBLite consensus disorder prediction 1 36 - -
Mepo4g01655 728 SUPERFAMILY RING/U-box 682 727 - -
Mepo4g01655 728 PANTHER SI:CH211-59O9.10 358 728 - -
Mepo4g01655 728 MobiDBLite consensus disorder prediction 181 206 - -
Mepo4g01655 728 MobiDBLite consensus disorder prediction 295 326 - -
Mepo4g01655 728 FunFam RING/U-box superfamily protein 648 728 - -
Mepo4g01655 728 MobiDBLite consensus disorder prediction 419 446 - -
Mepo4g01655 728 MobiDBLite consensus disorder prediction 371 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01655 Mepo-Chr4 21694033 21701639 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01655 3 728 C3H Transcription Factor Family AT1G04790 32.986 1.17e-77 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01655 - - tpra:123897569 1036.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g01655 4 21694033 21701639 Mepo4g01655 4 21694033 21701639 ECH