Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01613 ATGGAGCGAATTGCTCAGAATGCCAATTACACAGTTGAGCATACAAGGACTGATGAAAATGGAGACAAAATTTTGACTGTTTTTGAACCACATAGCAATCCGAATGTTCAACATGACTTGGATCTTTGGATGCGTGTCCGTGAATATGACAAAGCCAACGCGGAGTTACCCTTCACTCCGGTTCTTTCTAAGAAACAAAAGCAACAAGTTAGAAAGCAGCTTCAGATTGATATCGAAATTGTAACTAAGATGGCCAAGGATTACCCAGACTTCTTCAAAGTTTTTTCCACAGAGAAGCACACTGAAAGAATGCGTATCCCAAATGCTTTTGTGAACTTGATGTGTTCAAAAAGGACGGTAATAAAGGATTTTATCCTAAGAGATCGAAGAGGAAGAGATTGGCATGTCAAAGCTCGTCATATTGGCGATGAGCTTTATTTTGACGATGGCTGGAAGCAATTTAGAGAGGAAAATTCTTTAGAGGAGGATGATTTCCTTGTTTTTACACATATTGAAAATAACATATTCAGGTTCAAAATTCTTCAACTATCATCAATGTGTGAAAAGAAGAAGGTAAGTGACGTGGAGGTAAATAACAATATGGAGGATGAGGAAGAGGACGATGATGGTGATGACGATGATGATTATGAATATGCTGCTGCTGCTGCTGATGATGATGATGATTATGATATTATGGCAGAGGAAGAAGATCATGATGATGATATTATGACAGAGGAAGAACATCATGATACCGATGATGATGGTGATGACGACGACGAGAATGAAAGAATGTATAAGGAAATTAGTAGAAGTAAACATCAACATTGCAGAACCTGCAAGTGCAAATCTTCGGACATTGGGAGCAGCTCTACACGTTCAAAACTTGAAGATGACGAAATTGATGCTGAAATGTATATTCAACCAGGAAATCCACACTTCATTGCAAAATATATTCATTCCAGACCTAATGAATTGTTTATTCCAAAGAAAGTTATCAAGGATTTCTGCTTCTGCTTCACAAAACATGTCACCCTTGTGTGTTGCCACTGCAAGGACATTCAGAGCAATGACTTAGCAGCCTATCATCACATCTTGCCACAAATAAGCACAACACATATCGAAAAGAGAGGCCAAGTACGTACATGGAGAGATGGTCGAGTACGTGTGCTAGGGTGGGAAGATTTTTGTGGAAAGAGCAAGATCACAGAAAATGATAGTTGCTTATGCGAGATTGTGCTGCGTGAAGATGGAACAATCGAAATGTTAAGGGTGCACATTGTTAGGAAAGGATGA 1293 0.3906 MERIAQNANYTVEHTRTDENGDKILTVFEPHSNPNVQHDLDLWMRVREYDKANAELPFTPVLSKKQKQQVRKQLQIDIEIVTKMAKDYPDFFKVFSTEKHTERMRIPNAFVNLMCSKRTVIKDFILRDRRGRDWHVKARHIGDELYFDDGWKQFREENSLEEDDFLVFTHIENNIFRFKILQLSSMCEKKKVSDVEVNNNMEDEEEDDDGDDDDDYEYAAAAADDDDDYDIMAEEEDHDDDIMTEEEHHDTDDDGDDDDENERMYKEISRSKHQHCRTCKCKSSDIGSSSTRSKLEDDEIDAEMYIQPGNPHFIAKYIHSRPNELFIPKKVIKDFCFCFTKHVTLVCCHCKDIQSNDLAAYHHILPQISTTHIEKRGQVRTWRDGRVRVLGWEDFCGKSKITENDSCLCEIVLREDGTIEMLRVHIVRKG 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01613 430 Gene3D - 291 429 IPR015300 -
Mepo4g01613 430 MobiDBLite consensus disorder prediction 199 216 - -
Mepo4g01613 430 MobiDBLite consensus disorder prediction 237 261 - -
Mepo4g01613 430 PANTHER B3 DOMAIN-CONTAINING 86 414 - -
Mepo4g01613 430 Pfam B3 DNA binding domain 91 180 IPR003340 GO:0003677
Mepo4g01613 430 CDD B3_DNA 89 181 IPR003340 GO:0003677
Mepo4g01613 430 Gene3D - 61 187 IPR015300 -
Mepo4g01613 430 SMART B3_2 91 184 IPR003340 GO:0003677
Mepo4g01613 430 SUPERFAMILY DNA-binding pseudobarrel domain 306 428 IPR015300 -
Mepo4g01613 430 SUPERFAMILY DNA-binding pseudobarrel domain 87 182 IPR015300 -
Mepo4g01613 430 ProSiteProfiles B3 DNA-binding domain profile. 89 184 IPR003340 GO:0003677
Mepo4g01613 430 MobiDBLite consensus disorder prediction 195 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01613 Mepo-Chr4 21235434 21238158 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01613 89 428 B3 DNA Binding Superfamily AT3G06160 23.907 7.07e-22 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mepo4g01613 B3 2.1e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01613 - - mtr:120578114 435.647