Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01579 ATGGCCCTCAACTCTTCTTCCAATAAGGTTATCACACCATCAGATGATGAACTTCTACAACAATACCTTTACAACAAAATTCACAACAAACCTTTGCCCAATCATATCACCATTCTTGAACACGATTTATTCGGCACTGCAAAGAATCCATGGGAGATTTGGGAAGAGTTTGGAGCTTCCTACTCATATCGTGGAAAAGACTTATACTTCTTTACAACCTTAAAGAAGAAATCTGCCACTAGTTCGCGCGTAGTTCGCACTATTGGACTTGGTAGATGGGAAGGTGAAGACGCTGGAAAAAATATAGTCAGCAAAGACAAGAACCAAATCCTCGGCATGAAAAAACGTTTTCGTTTTGAGAAGAGTGACACTTCCCAAGATGGTGGATGGATCTTGCATGAATACAGCCTCCACAATTCTATGATAAGCAATCCTTTGGCCAATAATTATGTTCTATGCAGATTTAGAAAGAATTGCACTCTCTTACCTGCAAGCAAAAATACTATTGCACAAGATAAACCAAGAATGACAGGCAAGAGAAAATATATAATTTATGAAGAACCAACAAAAGAATCAAATGGCACTGTGGTTAATACAAAATCTCAACGTAAGGAAAAAGAAAAATATGTGGAATGGCCAAAAGAGAACTTTGTTCTTGCACTCGAAGCACTCACCAAAACTGAGAACAATAATGTTTGGTTGGGGAAAAATATTGACCAAAATCAAAATAATCAACTTAACAATGGGAAAAACAAGATTGAAGATGATGGTGATGTCATTACAAGCAAAGAAGAAGATGGTGATACTACTATGTCTTGGCCTGAGTTGTTTTCATTGCAGCTGAGAAATATGAATGAAGGATGCTTGATCGAAGAGGAAGATGTTCCAATGATTTACAATCAGTTTTATAAGGACTTGTTGTCAGAAAATATTAATATAAATTAA 945 0.363 MALNSSSNKVITPSDDELLQQYLYNKIHNKPLPNHITILEHDLFGTAKNPWEIWEEFGASYSYRGKDLYFFTTLKKKSATSSRVVRTIGLGRWEGEDAGKNIVSKDKNQILGMKKRFRFEKSDTSQDGGWILHEYSLHNSMISNPLANNYVLCRFRKNCTLLPASKNTIAQDKPRMTGKRKYIIYEEPTKESNGTVVNTKSQRKEKEKYVEWPKENFVLALEALTKTENNNVWLGKNIDQNQNNQLNNGKNKIEDDGDVITSKEEDGDTTMSWPELFSLQLRNMNEGCLIEEEDVPMIYNQFYKDLLSENININ 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01579 314 Gene3D NAC domain 14 160 IPR036093 GO:0003677|GO:0006355
Mepo4g01579 314 PANTHER NAC TRANSCRIPTION FACTOR 56 12 198 - -
Mepo4g01579 314 Pfam No apical meristem (NAM) protein 12 137 IPR003441 GO:0003677|GO:0006355
Mepo4g01579 314 ProSiteProfiles NAC domain profile. 5 158 IPR003441 GO:0003677|GO:0006355
Mepo4g01579 314 SUPERFAMILY NAC domain 12 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01579 Mepo-Chr4 20803552 20805300 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01579 13 154 NAC Transcription Factor Family AT5G13180 35.616 1.21e-15 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo4g01579 NAM 1.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01579 - - tpra:123896066 321.242