Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01573 ATGGTTTTGACAGAAACTAAACTTTGGCGTAAAGGACCGTATGAGAAGCCAATACTATGTAACGCTTGTGGACTACATTTCAAGGCAAAAGGAACCCTTGATAACTATCTTCCGAAGACATCCCAGCAAAATCAGTTATCAGACCTTGACGTTGAAAAGGAATCTGAAAGTGATCCCGAGCATTCAAACCAAATTCCAGAAAGGACACCATCGATTGTGAAGAATCAAATGGAGGAGTTTCAACAAAAGCTTCAAAGTCTTTGGGAATCTGAGAAAGAATCAAATGAATCATCTGCAGACAATATTTTGTTGCTTGATAATATGAACAACTGTATACCAAGCAATGAGATAGGTCCTACTTTCTGTTCTGTTTTGCTTGAGGTTGTTGGTGCCATGTTGCGATGTGCTATTGTTTTGGAGGTAACCATGGAAGCAACTAAAAGCACACAATCAATGGCAATTAAAGAGGAGACAGAGGAACATCACTTTGCTCAAAAAGGTAAAGGTAACTGCTTCTTTTGTGGAGAAGTTAGAGAAAGAGTTGGGGTATCTTGA 555 0.391 MVLTETKLWRKGPYEKPILCNACGLHFKAKGTLDNYLPKTSQQNQLSDLDVEKESESDPEHSNQIPERTPSIVKNQMEEFQQKLQSLWESEKESNESSADNILLLDNMNNCIPSNEIGPTFCSVLLEVVGAMLRCAIVLEVTMEATKSTQSMAIKEETEEHHFAQKGKGNCFFCGEVRERVGVS 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01573 184 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 38 - -
Mepo4g01573 184 PANTHER OSJNBB0038F03.10 PROTEIN 5 43 IPR044589 -
Mepo4g01573 184 CDD ZnF_GATA 4 32 IPR000679 GO:0006355|GO:0043565
Mepo4g01573 184 MobiDBLite consensus disorder prediction 49 63 - -
Mepo4g01573 184 MobiDBLite consensus disorder prediction 41 71 - -
Mepo4g01573 184 ProSiteProfiles GATA-type zinc finger domain profile. 4 31 IPR000679 GO:0006355|GO:0043565
Mepo4g01573 184 Gene3D - 3 58 IPR013088 GO:0006355|GO:0008270
Mepo4g01573 184 SMART GATA_3 4 44 IPR000679 GO:0006355|GO:0043565
Mepo4g01573 184 Pfam GATA zinc finger 4 32 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01573 Mepo-Chr4 20726998 20730965 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01573 3 38 C2C2-Gata Transcription Factor Family AT4G17570 63.889 7.56e-11 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mepo4g01573 GATA 1.3e-10 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01573 - - psat:127115742 103.219