Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01546 ATGGAATTAGAGATGATAACTTCAAGTGAAGATAGTGATGAGCAAGAAGTTCAAGATGAATGTATAGTAACCAAGAGATCTTATGATTGCACATTTTGCAAAAGGGGTTTCACCAATGCTAGGGCATTAGGAGGCCATATGAATATTCATAGGAAAGAAAGAACAAATTATAAGGCCAAACAAGGCACACCCAATTCCTCACCTTTTGTTCCAGCAGTTGTTTCAAGCCAACCCTCAACTTATTACTGCATTTTAGAGCCTCCTAGGAACTATGACATGTATCATCAAACATCAAAAACAAACCCTAGAAACCCTCCACCTACATTTCAATATGATTTTCTTAACACAAGCTCTCAATCTTTGTTGGGAACCAATTTGAGTCTCCAAATTGGTTCAAGCCATGAGGGTGATGGTCAAGTTTGGAGAGGAATTGAGAAAGATGGTGAAGGGGTGGACCTAGAGCTTAGGCTTGGTCACGATTCATACTCAAACTACTAA 498 0.3916 MELEMITSSEDSDEQEVQDECIVTKRSYDCTFCKRGFTNARALGGHMNIHRKERTNYKAKQGTPNSSPFVPAVVSSQPSTYYCILEPPRNYDMYHQTSKTNPRNPPPTFQYDFLNTSSQSLLGTNLSLQIGSSHEGDGQVWRGIEKDGEGVDLELRLGHDSYSNY 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01546 165 SUPERFAMILY beta-beta-alpha zinc fingers 25 55 IPR036236 -
Mepo4g01546 165 ProSitePatterns Zinc finger C2H2 type domain signature. 30 50 IPR013087 -
Mepo4g01546 165 PANTHER OS07G0101800 PROTEIN 10 160 - -
Mepo4g01546 165 Gene3D Classic Zinc Finger 8 68 - -
Mepo4g01546 165 ProSiteProfiles Zinc finger C2H2 type domain profile. 28 55 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01546 Mepo-Chr4 20431957 20432551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01546 28 60 C2H2 Transcription Factor Family AT5G43540 81.818 9.70e-14 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo4g01546 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01546 - - mtr:25483021 333.183