Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01543 ATGTATAAAGGAACAGCATCTGGATTCTTAATTTTCCTGCTCTTATTGGGTGTATCAGCAATTGCTAATGGATTTTCCAAATGCAACTGTGACGATGACACGAGCTGGTGGACAATTGAGAAGATTCTAGAATGGCAGAAAGTCGGCGATTTTCTGATCGCGGTGGCATACTTCTCGATCCCTATTGAGCTTCTTTATTTCATCAGTTGTGCAAACATTCCATTCAAATGGGTACTTTTTCAATTCATAGCTTTCATTGTACTTTGTGGAATGACACATTTGTTTAATAGCTGGACTTATGGACCCCACACATTTCAAATCATGCTGACACTTACTGTCTTGAAAGTCCTCACTGCATTGGTTTCATGTGCAACTACCATAACCCTCATCACTTTGATCCCTATGCTTCTTAAAGTAAAGGTTCGAGAGTTCTTGCTGAAGCGAAAGGCGAGAGAGCTTGGAATCGAGTATGGTATGATAATGAAACAGAATGAAGCTGGAATGCATGTAAGAATGCTTACTCAAGAGATTCGCAAGTCGCTCGATAGACATGAGATTTTGTATACTACCTTGGTTAAACTGTCGGAAACTTTAGGGTTGCAGAACTGTGCTGTATGGATGCCTAATGTTGATAAAACGGCGATGAATCTCACTCATGAATTGAATGGGAGGAATGTTAATTCTTCTATACCGATCATTGATCCGGATGTTGTAAGAATCAAGGGAGATAATGTAGTGCACATGATTGATTCTGACTCGCTGCTTGCTGCTGCGAGTAGTGGAGTTTCTGTTGATGCAGGACCGGTTGCTGCAATCCGAATGCCAATGCTTAGTGTTAGCGATTTCAAAGGGGGGACGCCTGAGGTAACGGAGGCCTGTTACGCGATACTTGTTTTGGTACTTCCTAGTGAAGAGGCTAGATCTTGGAGCAATCAAGAGCTTGAGATTATTAAAGTTGTTGCTGATCAGGTAGCCGTGGGTCTTTCTCATGCCGCGATTCTCGAAGAATCGCAACTTATGAGAGAGAAATTGGAGGAGCGAAATCGAGCATTGCAACAGGAGAAAAGGAACGCTATGATGGCGAGCGAGGCTAGAGCAGTTTTTCAGAAAGTCATGAGTAATGGAATGGGAAGGCCAATGCATTCAGTTATGGGATTGCTTTCAATGATGAAAGATGAGAATTTGAAGAGTGAACAGAAACTTATTGTGGATTCCATGGTAAGGACAAGTGGAGTCGTGTCGAACTTGATGAATGATGCTATGGACAATTCAGATAGGGACGGTGGAGGTGGAAGATTTCCTATGGAAATGAAATGTTTTGGTTTACATAACATGTTAAAAGAAGCAGCTTGCGTCGCCAAGTCTATGGCTTTATGTAAGGGTTTTGGATTTAAGGTTGAGGTTGATAGGACTTTGCCTAACTATGTTATCGGTGACGAGAAGAGGGTTTTTCAGGTGATTTTGCACATGGTTAGGAACTTGATAGACTGTAACAATGGGGGAGGGATTCTTGTGTTTCAAGTTTTCACAGAATCTGGAAGTCGAGGAAGGAGTGAACATGGATATGCAACTTGGAGACCAAGCTCGTCTAGCGGTGATGTGCATGTTAGATTTGACATAGGGATCAATAGCAGTAATTCTGAATCAGACACCTCAGTTACTTCAGGGAGGCTTGCAGGAAGGATGCGTACGAGTGACCGGGCATTCGACGAAAGTTTGAGCTTCAGCATTTGCAAGAAGATAATCCAGTCAATGAAAGGTAGCATATGTTCAGTACCAAATGCTAGAGGCTTTCCTCAACTGATGACCCTTGCTCTTCGGTTTCAACTACGCCATTCTACTGCGGTAACCATCCCCGAACCAGGGGAGAGTTTGGAGTCATCTGATCCAAATTCCTTGTTCAGAGGTCTGCAAGTCTTGTTGGCCGACAACGACAATGTTAATAGAGCAGTAACACAGAAATTTCTCCAGAAACTAGGATGTATTGTTACATCTGTTTCTTCCGGATTTGAATGCCTCAATCTTGTTGGCCATGCTGGTGCATGCCCCTTTGAAGTTGTTCTTTTGGACCTTCACTTGCCTGATTTAGATGGATTTGAAGTTACCGCAAGGATCCGGAAGTCCAAAAGCCGTAACTGGCCTATCGCTGTTGCTTTATCGGCAAGCTCAGAAGAAGAATTAAGGGAAAAATGTATGCATATTGGGTTTAATGGAGTTATCCGTAAGCCGATTCTGTTGCAAGGATTCGCCGGAGAACTCCTAAAAATCCTGAAGGGAAATTAG 2283 0.4284 MYKGTASGFLIFLLLLGVSAIANGFSKCNCDDDTSWWTIEKILEWQKVGDFLIAVAYFSIPIELLYFISCANIPFKWVLFQFIAFIVLCGMTHLFNSWTYGPHTFQIMLTLTVLKVLTALVSCATTITLITLIPMLLKVKVREFLLKRKARELGIEYGMIMKQNEAGMHVRMLTQEIRKSLDRHEILYTTLVKLSETLGLQNCAVWMPNVDKTAMNLTHELNGRNVNSSIPIIDPDVVRIKGDNVVHMIDSDSLLAAASSGVSVDAGPVAAIRMPMLSVSDFKGGTPEVTEACYAILVLVLPSEEARSWSNQELEIIKVVADQVAVGLSHAAILEESQLMREKLEERNRALQQEKRNAMMASEARAVFQKVMSNGMGRPMHSVMGLLSMMKDENLKSEQKLIVDSMVRTSGVVSNLMNDAMDNSDRDGGGGRFPMEMKCFGLHNMLKEAACVAKSMALCKGFGFKVEVDRTLPNYVIGDEKRVFQVILHMVRNLIDCNNGGGILVFQVFTESGSRGRSEHGYATWRPSSSSGDVHVRFDIGINSSNSESDTSVTSGRLAGRMRTSDRAFDESLSFSICKKIIQSMKGSICSVPNARGFPQLMTLALRFQLRHSTAVTIPEPGESLESSDPNSLFRGLQVLLADNDNVNRAVTQKFLQKLGCIVTSVSSGFECLNLVGHAGACPFEVVLLDLHLPDLDGFEVTARIRKSKSRNWPIAVALSASSEEELREKCMHIGFNGVIRKPILLQGFAGELLKILKGN 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01543 760 SUPERFAMILY GAF domain-like 185 331 - -
Mepo4g01543 760 PIRSF Ethylen_sen_hybr_HK 1 760 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Mepo4g01543 760 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 25 758 - -
Mepo4g01543 760 Gene3D - 430 609 IPR036890 -
Mepo4g01543 760 SUPERFAMILY CheY-like 634 757 IPR011006 -
Mepo4g01543 760 Gene3D - 328 427 - -
Mepo4g01543 760 SMART gaf_1 182 338 IPR003018 GO:0005515
Mepo4g01543 760 Pfam GAF domain 182 327 IPR003018 GO:0005515
Mepo4g01543 760 SMART REC_2 637 757 IPR001789 GO:0000160
Mepo4g01543 760 FunFam Ethylene receptor 4 331 425 - -
Mepo4g01543 760 Coils Coil 334 361 - -
Mepo4g01543 760 Gene3D - 172 327 IPR029016 -
Mepo4g01543 760 ProSiteProfiles Response regulatory domain profile. 638 757 IPR001789 GO:0000160
Mepo4g01543 760 CDD HATPase_ETR2_ERS2-EIN4-like 472 606 - -
Mepo4g01543 760 Pfam Response regulator receiver domain 639 744 IPR001789 GO:0000160
Mepo4g01543 760 Gene3D - 621 755 - -
Mepo4g01543 760 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 435 510 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01543 Mepo-Chr4 20396845 20399783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01543 23 758 Miscellaneous Gene Families AT3G04580 51.802 0.0 738
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo4g01543 GAF 9.2e-12 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01543 K14509 - gmx:100802948 1037.71