Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01542 ATGAACAAACGGCCCCACACCGAACTTTTCATCAACGAAACCAAAAGAAGAGAAGATGAAGAAGAAGATGAAGAAAGAGACGACGATGAACCAAAAGAAGGTGCAGTCGAAATTGGAAACCGAAGACCAAGAGGAAGACCACCAGGTTCAAAAAACAAACCAAAACCACCAATTTTCGTAACAAGAGACAGTCCAAATTCACTGAAAAGCCATGTGATGGAAGTATCCTCTGGAGCAGATGTAGCTGAAAGTGTAGCCCAGTTTGCAAGAAGGCGACAGCGCGGTGTTTGTGTTCTAAGTGGTAGTGGATCAGTTGCAAATGTTACCCTTAGACAACCAGCAGCACCAGGAGCTGTTGTAGCACTTCATGGAAGGTTTGATATTCTATCGTTAACCGGAGCTTTTCTACCGGGACCAGCTCCTCCAGGCGCAACCGGACTAACAGTGTACTTAGCCGGTGGACAAGGGCAAGTTGTTGGTGGTAGTGTTGTTGGACCTTTGATTGCTGCTGGACCTGTTATGGTTATTGCTGCTACTTTTGCTAATGCTACTTATGAAAGATTGCCACTTGAAGAAGATGAGGATGAAGGTGGTGGGGTCCATGGTGGACATCAGGTTGGTGGTGGTGGTAATTCCTCTCCTCCTGGAATTGGAAGTAGCGGCGGTGGCGGAGGTGGGGGCCACATGCAGTCTGGCCACCATCTTCCAGATCCATCTTCTATGCCTTTGTATAATTTGCCACCAAATCTTCTTCCTAATGGTGGTCATGTGGGACATGAAGCTTTTCCTTGGCCTCATGGAATTAGGCCACCCTACTGA 819 0.4737 MNKRPHTELFINETKRREDEEEDEERDDDEPKEGAVEIGNRRPRGRPPGSKNKPKPPIFVTRDSPNSLKSHVMEVSSGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFDILSLTGAFLPGPAPPGATGLTVYLAGGQGQVVGGSVVGPLIAAGPVMVIAATFANATYERLPLEEDEDEGGGVHGGHQVGGGGNSSPPGIGSSGGGGGGGHMQSGHHLPDPSSMPLYNLPPNLLPNGGHVGHEAFPWPHGIRPPY 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01542 272 Gene3D - 69 196 - -
Mepo4g01542 272 PIRSF ESCAROLA 2 266 IPR014476 GO:0003680
Mepo4g01542 272 FunFam AT-hook motif nuclear-localized protein 68 196 - -
Mepo4g01542 272 Pfam Plants and Prokaryotes Conserved (PCC) domain 70 181 IPR005175 -
Mepo4g01542 272 CDD DUF296 69 152 IPR005175 -
Mepo4g01542 272 MobiDBLite consensus disorder prediction 1 66 - -
Mepo4g01542 272 ProSiteProfiles PPC domain profile profile. 65 204 IPR005175 -
Mepo4g01542 272 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 17 266 IPR014476 GO:0003680
Mepo4g01542 272 SUPERFAMILY AF0104/ALDC/Ptd012-like 65 193 - -
Mepo4g01542 272 MobiDBLite consensus disorder prediction 1 19 - -
Mepo4g01542 272 MobiDBLite consensus disorder prediction 192 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01542 Mepo-Chr4 20357075 20358909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01542 31 272 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 69.796 2.72e-100 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01542 - - gmx:100804543 300.827