Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01525 ATGGATTCTCTAGAATTATTAGAAAACACCGATTATTTGGATTTTCTTGGCGATTATCCTTTCATCGACCCATCTCCTCCCACCCATTTCCTTTGGTCCAATTCCAATCCAAGTGTGAGCATGGAATTTGACATTTCAAGTAACGTGGTTGCGTGTCAAGAGGAGAATACTAGGAAGAGTGTGAGCGCGGAAACTGACATTCCAAGTGGTGCTGTTGTGTGTCAAGAAGAGAATACAAGGAAGAGGGGACGCACTGAATCATGCTACAAGGCAGGAACAAAAGCTTGCCGTGAGAAATTGCGTAGGGAGAAACTCAATGAAAGATTTTGTGATTTGAGTGCTGTTTTGGAACCCGGGAGACCTGTGAGAACAGATAAACCGGCTATACTTGATGATGCTATCAGAGTTTTGAGCCAACTTAAAACTGAAGCTGAGGAACTCAAAGAATCAAATGAAAAATTATTAGAGGAAATAAAATGTTTAAAGGCAGAGAAAAACGAACTCCGTGAAGAGAAACTTGTTCTGAAAGCTGATAAAGAAAAGATTGAGAAGCAATTGAAAACTATGCCTATTTCACCAGCAGGGTTTATGCCTCCTCCTCCTCCTATGGCTGCTTATCAAGCTAGTGTGAACAAAATGGCTGTTTATCCAAACTATGGATATATCCCAATGTGGCATTATCTTCCTCAATCAGCTCGCGATACGTCCCAAGATCATGAGCTCAGGCCTCCTGCTGCTTAA 741 0.417 MDSLELLENTDYLDFLGDYPFIDPSPPTHFLWSNSNPSVSMEFDISSNVVACQEENTRKSVSAETDIPSGAVVCQEENTRKRGRTESCYKAGTKACREKLRREKLNERFCDLSAVLEPGRPVRTDKPAILDDAIRVLSQLKTEAEELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQLKTMPISPAGFMPPPPPMAAYQASVNKMAVYPNYGYIPMWHYLPQSARDTSQDHELRPPAA 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01525 246 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 89 140 IPR011598 GO:0046983
Mepo4g01525 246 Gene3D - 93 173 IPR036638 GO:0046983
Mepo4g01525 246 Coils Coil 130 185 - -
Mepo4g01525 246 PANTHER BHLH TRANSCRIPTION FACTOR 19 246 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Mepo4g01525 246 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 83 154 IPR036638 GO:0046983
Mepo4g01525 246 SMART finulus 95 146 IPR011598 GO:0046983
Mepo4g01525 246 FunFam Transcription factor bHLH104 92 173 - -
Mepo4g01525 246 CDD bHLH_AtILR3_like 94 169 - -
Mepo4g01525 246 Pfam Helix-loop-helix DNA-binding domain 93 140 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01525 Mepo-Chr4 20145965 20150543 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01525 69 246 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G14410 68.108 1.59e-81 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo4g01525 HLH 7.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01525 - - mtr:11419849 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g01525 4 20145965 20150543 Mepo4g01525 4 20145965 20150543 ECH