Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01518 ATGGAACGAAGGGTTCTTGATGGTATCATTAATAGGTTGCTTGATGTTAGAGGAAGACCTGGGAAACAAGTGCAGCTTTCAGAGGGAGAAATCAAGCAGCTTTGTGTGGTTTCTAGAGATATTTTCTTGAAGCAGCCTAATTTGTTGGAACTTGAGGCACCAATTAAGATATGTGGAGATATTCATGGCCAATATTCTGACCTATTAAGCCTATTTGAGCATGGTGGATTCCCTCCACGTTCCAACTACTTGTTCTTAGGTGACTATGTAGACCGTGGAAAACAAAGCTTGGAAACAATATGTCTTCTTCTAGCCTACAAAATTAAATACCCTGAAAACTTTTTCCTTCTAAGAGGAAACCATGAATGTGCTTCCATAAACCGCGTCTACGGATTCTACGACGAATGTAAAAGGAGATTCAATGTTAGGGTATGGAAGATATTTTCAGATTGTTTCAACTGTTTGCCGGTCGCGGCTATCATTGATGAAAAGATTATATGTATGCATGGTGGATTATCTCCTGAATTGCATAGTTTGAAACAAATAAGTAATTTGCCAAGGCCTAGTGAAGTTCCTGAAACTGGTCTTTTATGTGATCTTTTGTGGAGTGATCCTAGTAAAGATGTTCATGGTTGGGGAGTTAATGAACGTGGTGTTTCATTTACTTTTGGTGCAAGTAAGGTTGCAGAGTTTCTTCAAAGGCATGATCTTGACTTGATTTGTAGAGCTCATCAGGTCGTTGAAGATGGATATGAGTTTTTTGCTAATAGACAACTCGTGACTATTTTTTCTGCTCCTAATTACTGTGGAGAGTTTGACAATGCTGGAGCAATGATGAGTGTTGATGAGACACTTATGTGTTCTTTTCAGATATTAAAACCTGTGGATCATAAAATGCCTAAGTTTGGATTTAGGAGTACAACTTCATTCAAGAAGGCATTTCTTGGTGCTAAAGTAAGAGCTGATTGA 969 0.3839 MERRVLDGIINRLLDVRGRPGKQVQLSEGEIKQLCVVSRDIFLKQPNLLELEAPIKICGDIHGQYSDLLSLFEHGGFPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRVYGFYDECKRRFNVRVWKIFSDCFNCLPVAAIIDEKIICMHGGLSPELHSLKQISNLPRPSEVPETGLLCDLLWSDPSKDVHGWGVNERGVSFTFGASKVAEFLQRHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPVDHKMPKFGFRSTTSFKKAFLGAKVRAD 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01518 322 SMART pp2a_7 26 296 IPR006186 GO:0016787
Mepo4g01518 322 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Mepo4g01518 322 Gene3D - 2 303 IPR029052 -
Mepo4g01518 322 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Mepo4g01518 322 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Mepo4g01518 322 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Mepo4g01518 322 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Mepo4g01518 322 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Mepo4g01518 322 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Mepo4g01518 322 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Mepo4g01518 322 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
Mepo4g01518 322 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 10 298 - -
Mepo4g01518 322 CDD MPP_PP1_PPKL 5 294 - -
Mepo4g01518 322 FunFam Serine/threonine-protein phosphatase 1 302 - -
Mepo4g01518 322 SUPERFAMILY Metallo-dependent phosphatases 19 304 IPR029052 -
Mepo4g01518 322 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01518 Mepo-Chr4 20066156 20069672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01518 33 242 Calmodulin-binding Proteins AT5G63870 31.474 1.71e-28 110