Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01510 ATGGTTAGGGCTCCTTGTTGTGAAAAGAAGGGATTGAAAAAGGGTCCTTGGACCTTAGAGGAAGATGAAATCCTCACATCATACATCAATAAACATGGACATAGCAATTGGCGTGCCCTACCAAAACATGCAGGTTTATTAAGATGTGGAAAGAGTTGTAGGTTGAGATGGATTAACTATTTAAAACCTGATATTAAGAGAGGGAATTTTACTAATGAAGAAGAGGAAACTATCATCAAGATGCATGAGTCTCTTGGGAACAGGTGGTCAGCCATAGCAGCAAAATTGCCTGGAAGAACAGACAATGAAATAAAAAATGTGTGGCACACTCACTTGAAGAAAAGACTATTGGATCACAATTCAAATACCAAAAAAAGAGTGTCAAAACAAAAAATCAAAAGATCTGATTCCAATTCCAGCACTATAACTCAATCATATGAACCTTCTAATAGTCCTAATAATCATTTCCTTGAAATGGAAACTACATCATCAAATTGCACTTTTTCTAGTGATTTTTCATTACAAGGAAAAAGCTTCGACAATAGCATCATTTGTGAAGACCTTGAAGACTCATTTGTCACAATGCCTGAAATTGATGAAAGCTTTTGGTCAGAGACAGTAATTGATGATGAAATTAGTTCCACCATGCCATCAAATTCTATGACAGTTTCAAATGAATTACCAGATCAACAATACAATTTTAATAATTCAGTGGAAAATTTCCAAAACCCTTTTGATAATGATGATGGCATGGATTTTTGGTATGACGTGTTCATCAAATCAGGAGAATCAACAGAATTGCCAGAGTTTTAG 813 0.3506 MVRAPCCEKKGLKKGPWTLEEDEILTSYINKHGHSNWRALPKHAGLLRCGKSCRLRWINYLKPDIKRGNFTNEEEETIIKMHESLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLLDHNSNTKKRVSKQKIKRSDSNSSTITQSYEPSNSPNNHFLEMETTSSNCTFSSDFSLQGKSFDNSIICEDLEDSFVTMPEIDESFWSETVIDDEISSTMPSNSMTVSNELPDQQYNFNNSVENFQNPFDNDDGMDFWYDVFIKSGESTELPEF 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01510 270 CDD SANT 69 112 IPR001005 -
Mepo4g01510 270 MobiDBLite consensus disorder prediction 119 158 - -
Mepo4g01510 270 CDD SANT 16 61 IPR001005 -
Mepo4g01510 270 Gene3D - 68 143 - -
Mepo4g01510 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mepo4g01510 270 SMART sant 13 63 IPR001005 -
Mepo4g01510 270 SMART sant 66 114 IPR001005 -
Mepo4g01510 270 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mepo4g01510 270 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mepo4g01510 270 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mepo4g01510 270 MobiDBLite consensus disorder prediction 134 158 - -
Mepo4g01510 270 FunFam Myb transcription factor 11 67 - -
Mepo4g01510 270 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 212 - -
Mepo4g01510 270 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mepo4g01510 270 Gene3D - 13 66 - -
Mepo4g01510 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mepo4g01510 270 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01510 Mepo-Chr4 19979123 19981220 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01510 1 270 MYB Transcription Factor Family AT2G31180 49.275 1.12e-77 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo4g01510 Myb_DNA-binding 8.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01510 K09422 - gmx:100794205 366.696