Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01487 ATGATGGATCTTGTTATTGGTGGAAAATTCAAACTTGGAAGGAAAATTGGAAGTGGGTCATTTGGAGAAATTTATTTGGGTGTTAATGTGCAAACTCAAGAGGAAGTGGCTGTTAAGCTGGAACCTGTGAAGACAAAGCATCCTCAACTTCTGTACGAGTCCAAATTGTATATGCTTCTTCAAGGAGGAACTGGCATACCTCATATAAAGTGGTCTGGAGTCGAGGGTGAATACAATGTCATGGCCATTGACCTTCTTGGACCAAGTCTCGAAGACTTATTTAACTATTGCAGTAGAAAATTCTCTCTGAAAACAGTGTTGATGCTTGCTGATCAACTAATAAACAGAGTAGAGTATATGCACTCTCGGGGTTTTCTGCATCGTGATATAAAGCCCGACAACTTTCTGATGGGTTTAGGCCGCAAGGCAAATCAGGTATACATTATTGACTATGGCCTTGCAAAAAAGTATCGTGATCTTCAGACACATAAGCATATACCATACAGGGAAAACAAGAATCTCACTGGAACTGCTCGATATGCAAGTGTTAACACTCACCTTGGAGTTGAACAAAGCAGAAGAGATGATCTAGAATCACTTGGTTATGTACTAATGTACTTTTTGAGAGGAAGTCTTCCATGGCAAGGAATGAAAGCTGGCACTAAAAAGCAGAAATATGACAAGATAAGTGAAAAGAAAATGCTTACTCCAATAGAGGTATTGTGCAAGTCACATCCAACAGAATTCACATCATATTTCCACTATTGCCGATCATTGCGGTTTGAAGATAAACCCGATTATTCATATCTTAAGAGACTCTTCCGGGACCTATTCATTCGAGAAGGTTATCAGTTTGACTATGTATTTGATTGGACTATATTGAAGTATCCACAAATTGGATCCAGTTCTAGAACACGGCCAAGTGTGAAACCAGTCTTAAACCCAGGACCTTCTGGAGAGCGATTAGAACGGCCTTCAGTCGGACAAGAAATTCGAGATAGATTATCAGGTGCAGTGGGGGCATTTTCAAGAAGGAATGGCTCTGCGCAAGGACTGCAGCATAGGTCTCTAGATAATATGCCGTCTTCCAAAGATGTGCAACCTGATTCTGATAGGGCACGCAGTTCTACTCGTAATGGCAGTGCTTCAAAAAGGCCTATGATATCAAGCAGCAGACCAAGCTCTTCTGGGGAACCTAGTGAAAGCCGGTCTAGTCGATTGATCTCGAGCAGTAGTCGTCTATCGACTACTCAGAGGGTTCAACCAGGTCTTGAATCCAAACCATCCTTCACCCGTACTGCAGGGACACGTGGTGGTCGTGATGATACACTCAAGAGCTTTGAGCTCCTATCAATTGGTACAGGGAAAAGGAAATGA 1377 0.4212 MMDLVIGGKFKLGRKIGSGSFGEIYLGVNVQTQEEVAVKLEPVKTKHPQLLYESKLYMLLQGGTGIPHIKWSGVEGEYNVMAIDLLGPSLEDLFNYCSRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGMKAGTKKQKYDKISEKKMLTPIEVLCKSHPTEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRTRPSVKPVLNPGPSGERLERPSVGQEIRDRLSGAVGAFSRRNGSAQGLQHRSLDNMPSSKDVQPDSDRARSSTRNGSASKRPMISSSRPSSSGEPSESRSSRLISSSSRLSTTQRVQPGLESKPSFTRTAGTRGGRDDTLKSFELLSIGTGKRK 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01487 458 SUPERFAMILY Protein kinase-like (PK-like) 5 291 IPR011009 -
Mepo4g01487 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Mepo4g01487 458 FunFam Casein kinase 1-like protein 2 330 - -
Mepo4g01487 458 MobiDBLite consensus disorder prediction 346 364 - -
Mepo4g01487 458 SMART serkin_6 10 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01487 458 Pfam Protein kinase domain 11 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01487 458 Gene3D Transferase(Phosphotransferase) domain 1 1 315 - -
Mepo4g01487 458 PANTHER CASEIN KINASE-RELATED 14 392 - -
Mepo4g01487 458 MobiDBLite consensus disorder prediction 301 458 - -
Mepo4g01487 458 ProSiteProfiles Protein kinase domain profile. 10 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01487 458 MobiDBLite consensus disorder prediction 373 433 - -
Mepo4g01487 458 CDD STKc_CK1_delta_epsilon 9 283 - -
Mepo4g01487 458 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Mepo4g01487 458 FunFam Putative Casein kinase I 2 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01487 Mepo-Chr4 19697674 19703756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01487 9 214 MAP Kinase Kinase Kinase AT3G06030 26.389 1.36e-12 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mepo4g01487 Pkinase 4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01487 K08960 - cave:132177205 782.711