Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01477 ATGGGTGCTCCTAAGCAAAAATGGACCGGAGAAGAAGAGGCAGCTCTAAAAGCGGGAGTAGTCAAACACGGAGCTGGAAAATGGCGCAACATACTTAAAGACCCAGAATTCGACACTAGTTTGCGCAATCGCTCAAATATAGACCTCAAGGACAAATGGCGGAACTTGACTGGGACGACAACATCGGGATCAAGGAAGAAGAAAGAAAACATTGTGCATACACAATACCTACCTCCACCAAAAGTTGAAAATAATAATCAAGATTCAAGTGGAATATCAAGATTGGATCATGGGATTGCGTCAACTTCAACAAAAATACGCGAGGAAACAAGAAATGATTCTCCAAAAGCAACGGAGAGAAATGATGATGTTAACCTTCTTGCAGAATACAAAAATATTGATGAAGAGATTTTTGATATGATGAAGGGTCTCACATATCAACAGGCGTTAGAAGAAGCTGCAAAAGCAATGAAGGAGGCAGAAGCTGCCATGACTAAGGCTGAGGAAGCAACTAATGAGGCAGAGGCTGCTGAAGCTGAAGCAGAGGATGCACGATTGTTTGCAAAAGCAGAAATAAAGAAGGCATTAAAAATGCTCAAGATTTAA 606 0.4125 MGAPKQKWTGEEEAALKAGVVKHGAGKWRNILKDPEFDTSLRNRSNIDLKDKWRNLTGTTTSGSRKKKENIVHTQYLPPPKVENNNQDSSGISRLDHGIASTSTKIREETRNDSPKATERNDDVNLLAEYKNIDEEIFDMMKGLTYQQALEEAAKAMKEAEAAMTKAEEATNEAEAAEAEAEDARLFAKAEIKKALKMLKI 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01477 201 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 61 IPR017930 -
Mepo4g01477 201 MobiDBLite consensus disorder prediction 101 120 - -
Mepo4g01477 201 Pfam Myb-like DNA-binding domain 5 56 IPR001005 -
Mepo4g01477 201 CDD SANT_TRF 6 57 - -
Mepo4g01477 201 Gene3D - 8 84 - -
Mepo4g01477 201 PANTHER SINGLE MYB HISTONE 4 105 196 IPR044597 GO:0003691
Mepo4g01477 201 Coils Coil 146 187 - -
Mepo4g01477 201 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Mepo4g01477 201 FunFam Telomere repeat-binding factor 1 2 58 - -
Mepo4g01477 201 SUPERFAMILY Homeodomain-like 2 59 IPR009057 -
Mepo4g01477 201 SMART sant 4 59 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01477 Mepo-Chr4 19599501 19600106 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01477 1 95 Single Myb Histone (SMH) Gene Family AT5G67580 56.842 9.63e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo4g01477 Myb_DNA-binding 3.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01477 K09422 - vum:124826323 127.102