Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01468 ATGAGTGATTGTGTGGTACGCTTTGAGATCTACATCCCGAAAGACTGTGGGTATCAGATCATGGCAAAAAATGCTATTGGAATAGACCTTGGAACAACGTATTCTTGTGTTGCTGTGTGGCTTGATGAACAGAATAGAGTCGAGATTATCCACAATGACCAAGGAAATAGAATTACACCTTCTTTTGTTTGTTTCACTAATGATCGAAGGTTGATTGGTGATGCTGCTAAGAGTCAAGCTGCCTCTGACCCCGAAAACACTGTCTTTGATGCTAAGAGGTTAATCGGTAGGAAGTTTAGTGATTATGTTGTTCAAAATGATATAAAGTTGTGGCCATTCAAGGTCATTGGTGTGAATGACAAACCCATGATTATTGTTAAATATAAGGGTCAAGAAAAGCGCTTTTGTGCTGAGGAAATATCGTCTATGATTCTCACAAAGATGCGAGAGGTTGCAGAGAAATTTTTAGAGTCTCCCGTAAACAACGCAGTTGTTACCGTGCCTGCTTATTTCAATGATTCTCAACGAAAAGCCACTATAGATGCAGGTGCCATTGCTGGCCTTAATGTTATACGGGTAATCAATGAACCAACAGCTGCAGCTATTGCATATGGCCTTGACAAGAGGATTAACTGTGTTGGAGAAAGAAATATATTTGTCTTTGATCTTGGTGGTGGCACTTTTGATGTGTCTATCCTAACAATTAAGGACAAGGTCTTCCAAGTTAAGGCCACAGGCGGAAACACTCACCTTGGAGGAGAGGACTTTGATAACAGAATGGTCAAATACTTTGTGCAGGAATTCAAGAGGAAGAACAAAGTGGATATTACTGGGAACCCAAGGGCCCTGAGGAGATTGAGAACTGCGTGCGAAAGGGCAAAAAGGGTACTCTCTTTTACTACTGTCACTACCATTGAGGTAGATTGTTTATTTAACGGTATTGACTTCTTTTCATCGGTTACTCGTTCCAAGTTTGAAGAAATCAACATGGACTTTTTTAAGGATTGTATGAAGATAGTTGAAAGTTGTCTTGATGATGCTAAGATGAATAAGAGTAGTGTAAATGATATTGTCATTGTTGGTGGGTCATCTAGGATTCCCAAAGTGCAACAACTATTGAAGGATTTTTTCAAGGGAAAGGAATTGTGTATGAGCATCAACCCTGATGAGGCTGTTGCATATGGTGCAGCTGTCCAGGCTGCTTTGTTGAGTGAAGGTTTTAAAAATGTTCCAAACTTGGTGCTACAAGATGTAGCACCTTTGTCTCTTGGTGTCTCACTTAAAGGAGATATCATGGATGTTGTGATTAATAGGAACACTAGCATTCCTGTCAAGAAAACAAAATTTTATAAAACAGTTGTGGATAACCAAGCCTCTGTGGCAATTAAGGTTTACGAGGGTGAGAGAGCAAGAGCTAGTGACAATAATTTGCTTGGTATGTTTACTCTTTCTTGCATTCCAGGTCCTCGTGGCCAGCCCTTGGTAAAATGCTTTACTATCGATGAAAATGGTATCCTGACTGTTTCTGTGAAGGAAAGATCCACTGGCAATACAAACGAGATCACAATAACCAATGACAAAGAAAGGTTATCATCATATGAAATTAAAAAAATGATTCAAGAAGCCGAGGAATATTGTGCTGAAGATGAGAAATTCCTAAGGGAGGCGAAGGTAATGAATGCATTAGATGAATGTGTTTACAAGTTGAGGAATGCTATGAAGAATACGGATGTTAAATCAAAACTCTCTTCTGAAGAAGTTAAAAAGATCAATAGTGCAATTACAGTGGCTACAAATTTGCTTGATAAGAAGAATAACCAGCATAATGAAGTAGATGTTCTTGAGGGTAATCTGAAGGAGCTCGAGAGCATGTTCGAAAACCTTGTAGTCAAGACTGGCTAG 1902 0.3927 MSDCVVRFEIYIPKDCGYQIMAKNAIGIDLGTTYSCVAVWLDEQNRVEIIHNDQGNRITPSFVCFTNDRRLIGDAAKSQAASDPENTVFDAKRLIGRKFSDYVVQNDIKLWPFKVIGVNDKPMIIVKYKGQEKRFCAEEISSMILTKMREVAEKFLESPVNNAVVTVPAYFNDSQRKATIDAGAIAGLNVIRVINEPTAAAIAYGLDKRINCVGERNIFVFDLGGGTFDVSILTIKDKVFQVKATGGNTHLGGEDFDNRMVKYFVQEFKRKNKVDITGNPRALRRLRTACERAKRVLSFTTVTTIEVDCLFNGIDFFSSVTRSKFEEINMDFFKDCMKIVESCLDDAKMNKSSVNDIVIVGGSSRIPKVQQLLKDFFKGKELCMSINPDEAVAYGAAVQAALLSEGFKNVPNLVLQDVAPLSLGVSLKGDIMDVVINRNTSIPVKKTKFYKTVVDNQASVAIKVYEGERARASDNNLLGMFTLSCIPGPRGQPLVKCFTIDENGILTVSVKERSTGNTNEITITNDKERLSSYEIKKMIQEAEEYCAEDEKFLREAKVMNALDECVYKLRNAMKNTDVKSKLSSEEVKKINSAITVATNLLDKKNNQHNEVDVLEGNLKELESMFENLVVKTG 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01468 633 Gene3D Actin; Chain A, domain 4 253 335 - -
Mepo4g01468 633 Gene3D - 209 383 - -
Mepo4g01468 633 ProSitePatterns Heat shock hsp70 proteins family signature 1. 28 35 IPR018181 -
Mepo4g01468 633 FunFam Heat shock 70 kDa 252 335 - -
Mepo4g01468 633 ProSitePatterns Heat shock hsp70 proteins family signature 3. 357 371 IPR018181 -
Mepo4g01468 633 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 409 562 IPR029047 -
Mepo4g01468 633 SUPERFAMILY Actin-like ATPase domain 215 403 IPR043129 -
Mepo4g01468 633 Coils Coil 604 631 - -
Mepo4g01468 633 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 408 559 IPR029047 -
Mepo4g01468 633 PRINTS 70kDa heat shock protein signature 354 370 - -
Mepo4g01468 633 PRINTS 70kDa heat shock protein signature 412 431 - -
Mepo4g01468 633 PRINTS 70kDa heat shock protein signature 76 84 - -
Mepo4g01468 633 PRINTS 70kDa heat shock protein signature 163 183 - -
Mepo4g01468 633 PRINTS 70kDa heat shock protein signature 491 507 - -
Mepo4g01468 633 PRINTS 70kDa heat shock protein signature 386 406 - -
Mepo4g01468 633 PRINTS 70kDa heat shock protein signature 226 236 - -
Mepo4g01468 633 PRINTS 70kDa heat shock protein signature 24 37 - -
Mepo4g01468 633 PRINTS 70kDa heat shock protein signature 54 66 - -
Mepo4g01468 633 FunFam Heat shock protein 70 26 216 - -
Mepo4g01468 633 Gene3D - 560 632 IPR029048 -
Mepo4g01468 633 SUPERFAMILY Actin-like ATPase domain 24 208 IPR043129 -
Mepo4g01468 633 ProSitePatterns Heat shock hsp70 proteins family signature 2. 220 233 IPR018181 -
Mepo4g01468 633 Gene3D - 89 143 - -
Mepo4g01468 633 FunFam Heat shock 70 kDa protein 406 561 - -
Mepo4g01468 633 Gene3D - 26 401 - -
Mepo4g01468 633 Pfam Hsp70 protein 25 629 IPR013126 GO:0005524|GO:0140662
Mepo4g01468 633 PANTHER HEAT SHOCK PROTEIN 70KDA 25 590 IPR013126 GO:0005524|GO:0140662
Mepo4g01468 633 FunFam heat shock 70 kDa protein-like 89 143 - -
Mepo4g01468 633 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 559 631 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01468 Mepo-Chr4 19446875 19451135 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01468 25 631 Calmodulin-binding Proteins AT3G12580 65.303 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01468 K03283 - gmx:102667578 874.004