Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01460 ATGGGAAAAACAAGCAAATGGCTTAGGAATCTCTTGAAAGGGAAGAAAGACAAAGAAAAAGAGAAAGAAAATTATGGAAATGGAACAGAAAATCCAACTACTCCAATCTCAACAACACCAAAGGAGAAAAGAAGATGGAGTTTCAGAAGATCATCAGCTTCCAAAGAGATGAATGTTGCAGAATCAAGTGTCACTTCTTCAGTGACAGTACAAAATGTTGCTATAGATTCTCAGAATTATGAAAGGAAGCATGTCTTGGATGTTGCTGCTGCTGATGGTGTGATCTTCTTGAATTCTTGTTCCAATGGAGGAACTAGAAGGAGTATTCAAGAGGCTTCTGCCATTAAAATTCAATCTGTCTTTAGGTCCTACTTGGCAAGAAAGGCCCTATGTGCTCTTAGAGGAATAGTGAAGCTGCAAGCACTAGTAAGAGGTCACTTAGTGAGAAAACAAGCAACTGAGACATTAAGATGCATGCAAGCTTTGGTCATAGCACAAGCAAGAGCTTGTGCTCAAAGGGCTAGAATGTTGTCAGAAGAAAAGACTAATCAAAAGCATTCACCCTACAGAAAAACCACAGAGGAAAATTTATTCATGCATGTGTATAATGAAATGGATAGAGGCTTGGAAGAGAATATAAAGACAGTGGAGATGGATGTATGTGAGTCCAAAGTTAACTCAAGAGGCAGAAACAGCACTGCAAATCATGAACTTTCTGAACACAGATTTTCTGCATATTACTCGCCAATCAGTTCATACTCAAAGAAAGAAAACTGCAAAGAATCACCAACACCATCAGCACTAACAGATTCAAGTCCAAGAGCATGCAGTGGACATTTTGAGGATTGTTCCTTCAGTACAGCACAAAACAGTCCCTATTACTACTCAGCTGTTTCAAGAGTAGATAATTCAAAGCTTCCTTTTGCTTTCACTAGACAATCCTATGAAGAATCCATGACCAATGACTATCCATTATTTCCAAATTACATGGCTAACACAGAATCATCAAGAGCTAAAGTCAGATCACAAAGTGCACCGAAGCAAAGGCCGGACATGTATGAGAGACAACCTAGTAGGCGAAGAGCTTCTGTTGAAGGAAGAAATGTTCCAAGGCCAATGAGGATGATGAGGTCATCTTCACAGGTTGGTGTCACTGCACAAAACTATCAATATCCATGGTCAATAAAGCTTGATAGGTCCTCAGTGTCACTCAATGAGATTGAGGGTGGTGGCTCCACAAGTACAGTACTAACAAACTCTAACTACTGCAGATCTCTTGTTTCATATAGTCCTCATGGACCAAGGTACTGA 1311 0.3982 MGKTSKWLRNLLKGKKDKEKEKENYGNGTENPTTPISTTPKEKRRWSFRRSSASKEMNVAESSVTSSVTVQNVAIDSQNYERKHVLDVAAADGVIFLNSCSNGGTRRSIQEASAIKIQSVFRSYLARKALCALRGIVKLQALVRGHLVRKQATETLRCMQALVIAQARACAQRARMLSEEKTNQKHSPYRKTTEENLFMHVYNEMDRGLEENIKTVEMDVCESKVNSRGRNSTANHELSEHRFSAYYSPISSYSKKENCKESPTPSALTDSSPRACSGHFEDCSFSTAQNSPYYYSAVSRVDNSKLPFAFTRQSYEESMTNDYPLFPNYMANTESSRAKVRSQSAPKQRPDMYERQPSRRRASVEGRNVPRPMRMMRSSSQVGVTAQNYQYPWSIKLDRSSVSLNEIEGGGSTSTVLTNSNYCRSLVSYSPHGPRY 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01460 436 ProSiteProfiles IQ motif profile. 110 138 IPR000048 GO:0005515
Mepo4g01460 436 MobiDBLite consensus disorder prediction 27 41 - -
Mepo4g01460 436 Pfam IQ calmodulin-binding motif 112 130 IPR000048 GO:0005515
Mepo4g01460 436 Pfam IQ calmodulin-binding motif 134 151 IPR000048 GO:0005515
Mepo4g01460 436 SMART iq_5 132 153 IPR000048 GO:0005515
Mepo4g01460 436 SMART iq_5 109 131 IPR000048 GO:0005515
Mepo4g01460 436 MobiDBLite consensus disorder prediction 1 45 - -
Mepo4g01460 436 ProSiteProfiles IQ motif profile. 134 161 IPR000048 GO:0005515
Mepo4g01460 436 Pfam Protein of unknown function (DUF4005) 311 368 IPR025064 -
Mepo4g01460 436 MobiDBLite consensus disorder prediction 10 26 - -
Mepo4g01460 436 PANTHER IQ-DOMAIN 5-RELATED 1 365 - -
Mepo4g01460 436 MobiDBLite consensus disorder prediction 352 367 - -
Mepo4g01460 436 Gene3D - 109 163 - -
Mepo4g01460 436 MobiDBLite consensus disorder prediction 334 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01460 Mepo-Chr4 19366361 19369040 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01460 1 431 IQD Protein Family AT4G14750 47.427 2.53e-96 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01460 - - pvu:PHAVU_007G277500g 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g01460 4 19366361 19369040 Mepo4g01460 4 19366361 19369040 ECH