Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01430 ATGAAAACTCTCAAACCCCATCACCACCAATTATCAACCCTCATCTTCATCCTCCTCTTCCCCTTCCTTAAATCACAAACTGCAAGACAAAAAAACAACACAGGCTACACTTGTCCCAACAACATAAACCAAACAAACACTTATCCATGCCAAACCTATGTTTACTACAAAGCAACACCACCAAATTACCTCGATTTAGCTACCATTTCAGACCTTTTTCAACTTAGTCGCTTAATGATCTCAAAACCAAGCAATATCTCTTCACCTTCTTCTCCTCTACTCCCTAACCAACCTCTTCTCATTCCCTTAACTTGTTCATGCAACTTCATCAACACCACTTTTGGTTCCATTTCTTACTCCAACATCACTTACACCATCAAACCAAACGACACTTTCTTCCTTGTTTCAACTATAAACTTCCAAAACCTTACTACTTATCCTTCTGTTGAAGTTGTTAATCCTAATCTTGTTGCTACTAATCTTTCTATTGGTGATAATGCTGTGTTTCCTATTTTTTGTAAGTGTCCTGACAAAACCAGAACAAATTCTAGTTTCATGATATCTTATGTTGTTCAACCTCATGATAATGTTTCTTCTATTGCTTCTTTGTTTGGAACAAGTGAAAAGTCTATAGTTGATGTTAATGGTGAAAAGTTATATGAATATGATACTATTTTTGTTCCTGTTGCTGAATTACCTGTTTTGAAACAACCTAGTACTATTGTTCCTTCTCCTGCTCCAAGTGGAAATTCTGATGATGGTGATGGTGATGATGATAAGAGTGGAATTGTTAAAGGGTTGGCTATTGGATTAGGAATTTTAGGGTTTTTGTTGATTTTGGTTATAGTGTTTTGGTTTTACAGAGAGGTTCTGTTTAAGAAGGAAAAGAAAGGGAAGGGTTTGTATTTTGGAGATAAAGGGCATAAAGGGAATGATGAAAAGAAGAAGAAAATGGATGTGAATTTTATGGCTAATGTTTCTGATTGTTTAGATAAGTATAGAGTTTTTGGATTTGATGAATTGGTTGAAGCTACTGATGGGTTTGATGAGAGGTTTTTGATTCAAGGGTCTGTTTATAAAGGTGAAATTGATGGACAAGTTTATGCTATTAAGAAGATGAAGTGGAATGCTTATGAAGAGCTCAAAATCTTACAAAAGGTAAACCATGGAAATTTGGTGAAGTTGGAGGGATTTTGTATAGAACCAGAAGAATCAAATTGCTACCTAGTCTATGAATATGTTGAAAATGGATCTCTCTACTCATGGCTACATGAAGAAAAAAACGAAAAGTTGAATTGGGTAACAAGGCTAAGAATAGCCGTTGACATTGCCAATGGTTTATTGTACATTCATGAACACACAAGACCAAAGGTTGTACACAAAGACATTAAAAGTAGCAACATTCTCTTGGACTCAAACATGAGAGCTAAAATTGCAAATTTTGGTCTTGCAAAGAGTGGAATTAATGCGATTACAATGCACATTGTAGGAACACAAGGGTATATTTCGCCCGAATATCTAGCCGATGGTATCGTGTCAACGAAGATGGATGTGTTTTCTTTTGGTGTTGTGTTGCTTGAATTGATTTCTGGGAAGGAAGTTATTGATGAGGAGGGAAATGTTTTGTGGGCAAGTGCTATAAAAACATTTGAAGTGAAAAATGAACAAGAAAAAGCTAGGAGACTTAAGGAATGGTTGGATAAGGCTATGTTAAAGGAGACATGTTCAATGGAAAGTTTGATGGGTGTACTTCATGTTGCAATTGCTTGTTTACATAGAGATCCATCAAAGAGGCCTAGCATTATAGATATTGTTTATTCACTTAGTAAATGTGAAGAAGCAGGATTTGAGCTCTCAGATGATGGGTTTGGTTCAGAAAGGTTGGTGGCTAGGTGA 1896 0.3597 MKTLKPHHHQLSTLIFILLFPFLKSQTARQKNNTGYTCPNNINQTNTYPCQTYVYYKATPPNYLDLATISDLFQLSRLMISKPSNISSPSSPLLPNQPLLIPLTCSCNFINTTFGSISYSNITYTIKPNDTFFLVSTINFQNLTTYPSVEVVNPNLVATNLSIGDNAVFPIFCKCPDKTRTNSSFMISYVVQPHDNVSSIASLFGTSEKSIVDVNGEKLYEYDTIFVPVAELPVLKQPSTIVPSPAPSGNSDDGDGDDDKSGIVKGLAIGLGILGFLLILVIVFWFYREVLFKKEKKGKGLYFGDKGHKGNDEKKKKMDVNFMANVSDCLDKYRVFGFDELVEATDGFDERFLIQGSVYKGEIDGQVYAIKKMKWNAYEELKILQKVNHGNLVKLEGFCIEPEESNCYLVYEYVENGSLYSWLHEEKNEKLNWVTRLRIAVDIANGLLYIHEHTRPKVVHKDIKSSNILLDSNMRAKIANFGLAKSGINAITMHIVGTQGYISPEYLADGIVSTKMDVFSFGVVLLELISGKEVIDEEGNVLWASAIKTFEVKNEQEKARRLKEWLDKAMLKETCSMESLMGVLHVAIACLHRDPSKRPSIIDIVYSLSKCEEAGFELSDDGFGSERLVAR 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01430 631 SMART serkin_6 352 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01430 631 FunFam PTI1-like tyrosine-protein kinase 3 414 621 - -
Mepo4g01430 631 Gene3D Phosphorylase Kinase; domain 1 318 413 - -
Mepo4g01430 631 SMART LysM_2 188 228 IPR018392 -
Mepo4g01430 631 SMART LysM_2 123 170 IPR018392 -
Mepo4g01430 631 Gene3D Transferase(Phosphotransferase) domain 1 414 620 - -
Mepo4g01430 631 SUPERFAMILY Protein kinase-like (PK-like) 334 608 IPR011009 -
Mepo4g01430 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Mepo4g01430 631 ProSiteProfiles Protein kinase domain profile. 330 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01430 631 CDD LysM 187 216 IPR018392 -
Mepo4g01430 631 Pfam Protein kinase domain 358 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01430 631 Pfam LysM domain 189 227 IPR018392 -
Mepo4g01430 631 Gene3D LysM domain 186 228 IPR036779 -
Mepo4g01430 631 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 13 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01430 Mepo-Chr4 18928178 18932159 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01430 35 610 Receptor kinase-like Gene Family AT2G23770 34.224 6.64e-84 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mepo4g01430 Pkinase 4.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01430 - - lang:109352405 835.869