Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01370 ATGTCTAACCACAAGGAAACAACAACTATCACCACAACAACCGATCTAATAGAACCCACTTCTCAAAACGCTATAACAGTAAAAAAACCGCCGTCAAAAGACCGTCACAGTAAAGTAGACGGACGAGGAAGACGCATAAGAATGCCCATAATCTGCGCCGCACGTGTTTTCCAGTTGACACGTGAGCTTGGTCATAAATCCGACGGTCAAACTATTGAATGGCTTCTCCGTCAAGCTGAACCGTCGATCATCGCCGCCACCGGTACCGGAACTACTCCTGCTTCTTTCTCTTCGCTTTCTGAGCATAAACCTTTTCTTCAACCTTCTCCGTTTATTCTTGGTAAACGTTTACGTGATGATGATGGTGATGCTGTTTCGGTTGCCGCGCCTACTGCTCCGCCGGGGTTGTGGCGGCCGGATTTTGCTCAGCTTTGGAGCTTTGCTGCTGCTGCTCAACCGCCGCCGGAAGGTTTTTCTGTTTCTCAGCATAATTCATTGTTTCATCATCAACAGCAGCAGCAACAACAACATCAGCACCACCAGCAGCATCAACAGCAACAAGGCTCTATGGGTGAAGCTTCCGCGGCGAGGTTAGGGAATTATCTTCCTGGTCATCTGAATTTGTTGGCTTCATTGTCTGGTGGGAATGGAAATTCTGGTCGTGGAGATGACGAAGATCGTTGA 684 0.4825 MSNHKETTTITTTTDLIEPTSQNAITVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSLSEHKPFLQPSPFILGKRLRDDDGDAVSVAAPTAPPGLWRPDFAQLWSFAAAAQPPPEGFSVSQHNSLFHHQQQQQQQHQHHQQHQQQQGSMGEASAARLGNYLPGHLNLLASLSGGNGNSGRGDDEDR 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01370 227 ProSiteProfiles TCP domain profile. 32 86 IPR017887 -
Mepo4g01370 227 MobiDBLite consensus disorder prediction 1 42 - -
Mepo4g01370 227 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 22 182 IPR005333 GO:0003700
Mepo4g01370 227 Pfam TCP family transcription factor 32 187 IPR017887 -
Mepo4g01370 227 MobiDBLite consensus disorder prediction 153 193 - -
Mepo4g01370 227 MobiDBLite consensus disorder prediction 157 193 - -
Mepo4g01370 227 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01370 Mepo-Chr4 18042764 18044609 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01370 10 227 TCP Transcription Factor Family AT5G23280 57.724 1.31e-75 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mepo4g01370 TCP 3.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01370 K16221 - gmx:100795254 250.366