Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01362 ATGGGTGCAACAAATGTTGTCAAATGTAAAAGAAGTAAAATTAGAAGAAAAATGGTTGAAAAAAGTTCAATTACTCACAAATCGAGTAAAATTGATTTGGATGATCTAAATTGGACAAACATGATTCCAGAATGTCCAGTATACCATCCATCAGAACAAGAATTTGAGCATCCTTTGGTTTATCTACAGAAAATTGCTCCCGAGGCTTCTAAATATGGTATATGCAAAATTGTTTCTCCAATCAGTGCCTCTAATCCTGCTGAGTTTGTCTTAATGAAAGAGAAAAAGGACTTCAAGTTTGAAACAATTGTACAGCCTCTTAGGCTTTCCAAATGGAATGAGAAGGATATAATAACCTTCTCTAAGAGAGGAAGAAAATTTACATATCAAGAGTTTGAGGCTATTGCAAACAAGGCATTTTCCAATAGATTTTGCATTTCAGAAGATCTTTCTTCGTTAGATATCGAAAAAGCGTTCTGGCACGAAATGATACATGGAGAGAAGGGAACAGTTGAGTATGGAGTCAACATTGAGGGTAGTGTCTTTTCATGTGATCCTGATGATAAACTTGGAATGAGCAAATTCAATTTGAAGAATTTGGCGCGGCTGCCGCAATCTCCGTTGCGTTTAGTTGACAGAGGAATTCCTGGAATAACTGATCCTATGCTTTATATTGGGATGCTATTCAGTATGTTTGCATGGCATGTAGAAGATCACTATTTGTACAGCATAAATTATCATCACTCAGGTGGAAACAAAACTTGGTATGGCGTGCCTAGCTCTGCAGCCTCTCAATTTGAAAAGACTGTCTTGAATCATGTGTATTGCAACAAAATCTTATCAGAACATGGAGAGAATGGTGCATTCCAATTTCTTGCACAAAAAACAACCATGTTCCCACCTAATGTCTTGTTACAACATGACGTGCCGGTTTACAAGGCGGTGCAAAAGCCAGGAGAGTTTGTCATCACCTTTCCTAATTCATATCATGCTGGATTTAGTCATGGTTTTAACTGTGGAGAAGCTGTAAACTTTGCTATTGGTGATTGGTTTCCATTTGGGGCTGCAGCAAGCAAACGTTATGCACATCTTAAAATGCTGCCTATAATTCCATATGAGGAACTTGTTTGTAAAGAAGCTATGCTTATCTACAAGTCATCAAAAGTCAGAAGTTACGAAAGCATACCCGAAGACATGGCAACTTATCGTGCTATTGTACAGTCTTTCTGGCATCTTATGCAATTCTATAAGACATCACTAGAGCGATTGAACAATTCAAGAAAGTCATCAAGATCTTCAAATACATCATTAGGTTCTGTGACATGCAGCCTTTGCCATAAGGATTGTTATGTAGCTTACCTGTTGTGCAAGAAATGCTATTCCTATCCAATTTGCCTTTTCCATGACATTGTGCCAAAAACTTGCTTATGCGGGGGAAAATATACTGTTTTTAAGAAGAATGACATGTCAGAACTCGAAGATGCTGCCAAAAGTTTTGAACAGGTAAAAGAATGCATTGACATGTTATCTTTAACATGTATATTCTCCTATAACATAATTGAGTGCATCAAAGATCTCAAAAATAATAAATGGCATGAGGGAAAAAGTACTAGAAGAACTGTTAGCTTGCTAGGCGCAACATCTAAACTGAAAACAAGAGTTGCGAACAACATCAAGCACACTGTTGAAAATATTCAAAAGAAGCCAAAGAATCGTCGTAGAAACAATGCGTCTCCATCAGTGATGAGTACCAAAAGAGCACGAATCCTTTCTAACTTGAGAAAACATAAATCAGAACTGATAATCAAAGTTCGTGCAGTATCTTCCCTTTTGGCGACATCTGAAAATTCAAAGTAA 1857 0.3716 MGATNVVKCKRSKIRRKMVEKSSITHKSSKIDLDDLNWTNMIPECPVYHPSEQEFEHPLVYLQKIAPEASKYGICKIVSPISASNPAEFVLMKEKKDFKFETIVQPLRLSKWNEKDIITFSKRGRKFTYQEFEAIANKAFSNRFCISEDLSSLDIEKAFWHEMIHGEKGTVEYGVNIEGSVFSCDPDDKLGMSKFNLKNLARLPQSPLRLVDRGIPGITDPMLYIGMLFSMFAWHVEDHYLYSINYHHSGGNKTWYGVPSSAASQFEKTVLNHVYCNKILSEHGENGAFQFLAQKTTMFPPNVLLQHDVPVYKAVQKPGEFVITFPNSYHAGFSHGFNCGEAVNFAIGDWFPFGAAASKRYAHLKMLPIIPYEELVCKEAMLIYKSSKVRSYESIPEDMATYRAIVQSFWHLMQFYKTSLERLNNSRKSSRSSNTSLGSVTCSLCHKDCYVAYLLCKKCYSYPICLFHDIVPKTCLCGGKYTVFKKNDMSELEDAAKSFEQVKECIDMLSLTCIFSYNIIECIKDLKNNKWHEGKSTRRTVSLLGATSKLKTRVANNIKHTVENIQKKPKNRRRNNASPSVMSTKRARILSNLRKHKSELIIKVRAVSSLLATSENSK 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01362 618 Gene3D Cupin 45 408 - -
Mepo4g01362 618 SMART JmjN_1 44 85 IPR003349 -
Mepo4g01362 618 PANTHER LYSINE-SPECIFIC DEMETHYLASE 38 584 - -
Mepo4g01362 618 ProSiteProfiles JmjC domain profile. 192 362 IPR003347 -
Mepo4g01362 618 SUPERFAMILY Clavaminate synthase-like 197 380 - -
Mepo4g01362 618 ProSiteProfiles JmjN domain profile. 45 86 IPR003349 -
Mepo4g01362 618 Pfam JmjC domain, hydroxylase 222 345 IPR003347 -
Mepo4g01362 618 Pfam jmjN domain 46 78 IPR003349 -
Mepo4g01362 618 SMART cupin_9 192 362 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01362 Mepo-Chr4 17942401 17952712 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01362 42 500 JUMONJI Transcription Factor Family AT2G34880 31.895 9.81e-60 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mepo4g01362 JmjC 1.6e-40 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01362 - - cam:101502558 932.554