Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01350 ATGCCAAATAAACCTTCAACCAACGATTCATCAACCATTAAAGAATCTAATCCTATTCCAAAGCAAAAGAAAAGTAGTTGGTTTTCATGGAGATGGATTAAAATGAAAATGAAGTCAACGTCTAAAACGGTGCCGCTTGAAGCCTCATTCTCTCATTATTCAAAGTCACGGTCAAAGTTTTCAACTCTTCATCATAAATCTAAAAAAACTCTACCAACCAATCCTCCACCGTCAATTCCGCCGTCTACGGTTGTCCCCGGCACCCCTTATTATACACCAACACAGACAAGGCATGGTCCAATTAATGACATTATTACAGAAGACACACATGAACAAGGTAGAACTACTCCAACACGACCAAAACGACAAGAACGAAGGCTATCCTCTACAACACAAAACCAAACGACAATAAAAAACCTCAAAAACGTACGAAGTTCGTATGATCCTATAGTTGGAATGTCCATACTAGTTGTGACCTTAGTGATAATGATATTTTGGGGTCGTTTTTGTGCCATCTTATGTACTTCAGCATGGTTGTATTTTATACCACGTTTTAGAAATAGTGGTGTTGGAAATCATGAGGAAGATGGTGCCAAAATAATGTCAAAGAATGATGTGGATTTTGATTCTGAGGAGTATAAGAAAAAAGTGATTATGGAAGGACTTCTTGGGAGAAATAATCGAGATTCAATTCAATGGTTAAAAAACTACCAAACTGGTAGGAACATTCATGATGATGAAGGCAAGTTTTTATTGAAAAAGGCTGGTCAACTCAATTATTTTGTTGGGTCACATGTTTGGGTTGAGGACCCTGATGAAGCCTGGATAGATGGAGAAATCCTTGAATCTAAAGATGATGAGATCACCATTAGCTATGAATCTGGAACAAAGGTTGTTAGCAAATCAGCTAACATCTATCCCAAAGATCCTGAATTTCCAACTGATGGTGTGGAAGATATGACAAGACTTTCATATATGCATGAACCGGGTGTACTTCAAAATTTGCAAATTCGTTATACCATCAATGAAATATATACGTACACAGGAAACATATTGATAGCAGTGAACCCTTTTCAAAGGTTACCTCATTTGTATGCAAATGAGACTATGGCAAAGTATAAAGGTGCGGATTTTGGTGAGCAGAGTCCACATCCTTTTGCAATTGCAGGTTATGCATATAGGTATCTTATGATAAACGAAGAGAAAAGCCAAGCAATTTTGGTTAGTGGAGAAAGTGGAGCCGGTAAAACAGAAAGTACTAAGATGCTTATGCATTACCTTGCCTATTTGGGAGGAAGAGCAGCAACTGAGGGACGGTCTGTGGAGCAACAAGTTCTTGAGTCCAATCCTGTTTTAGAAGCATTTGGGAATGCAAAAACTGTTAGGAATAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAGTTTGATCAAAAGGGGAGAATATCAGGAGCTGCTATCAGAACTTATTTGCTGGAACGATCACGTGTTTGTCAAGTTTCTGATCCTGAGAGAAATTATCATTGCTTTTATATGCTTTGTGCTGCACCACAAGAGGATGTTGATAAGTTCAAATTGGGAAATCCAAGAAACTTTCATTATCTCAATCAATCAAATTGCATTGAGCTTGATGCATTGGATGATGCTAAAGAGTATCTTGCAACAAGGAGAGCCATGGATGTTGTTGGAATCAGTTCTGATGAACAGGATGCTATATTTCGAATAGTAGCTGCTGTACTTCATTTAGGAAATATTGAATTTGTTAAGGCAGTTGATGAAGGAATGGATTCCTCTACACCTAAAGATGAAAAATCTCATTTCCATTTGAAAACGGCAGCTGAACTTTTGATGTGTGATGAAAAGTCCCTTGAAGACTCATTTTGCAAACGTGTTATGGTGACTCGTGGCGAGGCTATAACAAAATGGCTTGATCCAAATTCTGCAGCTCTAAGTAGAGATGCATTGGCTAAAATAGTTTATTCAAGGCTTTTTGACTGGATTGTAGACAAGATTAACAACTCTATTGGGCAAGATCCAAATTCAAAGAACTTAATTGGGGTTCTAGATATATATGGATTTGAGAGTTTCAAGACAAACAGCTTTGAGCAATTTTGTATCAATTTGACAAATGAGAAGTTACAGCAACATTTCAACCAGCATGTCTTCAAAATGGAGCAAGAGGAATATACAAAGGAAGAGATTGATTGGAGTTATATCGAGTTTGTTGATAATCAAGATGTTCTTGATCTCATAGAGAAGAAACCTGGTGGTGTTATTGCTCTTCTGGATGAGGCCTGTATGTTTCCAAGATCAACGCATGAAACATTTGCCGAAAAGCTATATCAAACACTTAAGGACAATAAGCGCTTCAGCAAGCCAAAGTTGTCGCGAACTGACTTCACTATCAATCATTATGCCGGTGATGTCACTTATCAAACCGATCTTTTCCTGGATAAAAACAAAGACTATGTTGTTCCAGAGCACGCTGCGCTACTCTGTGCTTCCAAGTGCTCTTTTGTTTCAGGACTTTTCCCACCTTTACCTGAGGAAACTACTAAATCAACAAAGTTCTCTTCTATAGCTGCTCAGTTTAAGCATCAACTGCAATCTTTGCTTGAAACTTTGAATGCCACTGAGCCACACTACATTCGTTGCGTAAAGCCAAATAATCTTCTTAAGCCAGGGATATTTGAGAACAACGATGTGTTACAGCAGCTTCGATGTGGAGGAGTAATGGAGGCAATTAGGATAAGTTGTGCTGGATATCCAACTAGAAAGAGCTTTGATGAATTTGTTCAGCGGTTTAGTATATTGGAACCTAAGGTTCTAAAATGCCCCGATGAGATTACTGCTTGCAAGAGGCTTCTAGACAGAGCAAACCTTAAAGATTATCAGATTGGAAAGACAAAAGTGTTTCTGAGAGCAGGTCAAATGGCAGAACTAGATGCATGCCGTGCCGAGGTCCTAGGGAGATCCGCAATCATTATCCAGAAAAAAGGTCGCTCATACATTTGTGAGAGACAGTACAAATTATTGCGATTCTCTGCCATAGAACTACAAAGGGCAGTAAGAGGACAAATTGCAAGGCATCGGTATGAAGGCATGAGAAGGGAAGCCGCGTCTTTGATAATCCAGAAACAATGCCGTATGTATATTTCTAGAACTGCTTATAAAACTACGTATGCCAAAGCTGTTTGCATTCAAGCTGGCATGCGAGGGATGACTGCTAGAAATGAGCTCAGATTCAGGAGACGGGCACAAGCTGCAACTGTTATTCAGAGTGACTACAGATGTTATTTAGCTCGTAATTATTTCCTAAAGCTAAAGAAAGCATCAATTTCTGTACAATGTTCGTGGAGGAGAACAAATGCACGAAGAGAACTTCGGAAGCTTAGAATGGCTGCTAAGGAAGCCAAGGCCCTAGAAGCCGCGAAAATTAATCTAGAAAAGCAAGTTGAGGAACTAAATTTGTGTCTAGAATCAGAGAAGAGAATGAGGGTAATGTATTTATTCATAGAAGCCAAGACACAGGAAAATGAAAAATTACAATGTGCTTTGCAAGAGATGGAGCGGCAGTTCGAAGAAACCAAGGCGCAACTCATTCAGGAACGTGAGGCTGCGAAGAATGTAGCTGCGCAAACTCCAACTATACAGGAAAATCATGTTGTTGACAATGAATTGGTCAATAAGCTTACTGCAGAAAATGAACAACTCAAGGTAACCATTACACAGAAAGTCTTCGGAAAATTTATGTCTCTAGCTGTGTAA 3771 0.3896 MPNKPSTNDSSTIKESNPIPKQKKSSWFSWRWIKMKMKSTSKTVPLEASFSHYSKSRSKFSTLHHKSKKTLPTNPPPSIPPSTVVPGTPYYTPTQTRHGPINDIITEDTHEQGRTTPTRPKRQERRLSSTTQNQTTIKNLKNVRSSYDPIVGMSILVVTLVIMIFWGRFCAILCTSAWLYFIPRFRNSGVGNHEEDGAKIMSKNDVDFDSEEYKKKVIMEGLLGRNNRDSIQWLKNYQTGRNIHDDEGKFLLKKAGQLNYFVGSHVWVEDPDEAWIDGEILESKDDEITISYESGTKVVSKSANIYPKDPEFPTDGVEDMTRLSYMHEPGVLQNLQIRYTINEIYTYTGNILIAVNPFQRLPHLYANETMAKYKGADFGEQSPHPFAIAGYAYRYLMINEEKSQAILVSGESGAGKTESTKMLMHYLAYLGGRAATEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQKGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPQEDVDKFKLGNPRNFHYLNQSNCIELDALDDAKEYLATRRAMDVVGISSDEQDAIFRIVAAVLHLGNIEFVKAVDEGMDSSTPKDEKSHFHLKTAAELLMCDEKSLEDSFCKRVMVTRGEAITKWLDPNSAALSRDALAKIVYSRLFDWIVDKINNSIGQDPNSKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGVIALLDEACMFPRSTHETFAEKLYQTLKDNKRFSKPKLSRTDFTINHYAGDVTYQTDLFLDKNKDYVVPEHAALLCASKCSFVSGLFPPLPEETTKSTKFSSIAAQFKHQLQSLLETLNATEPHYIRCVKPNNLLKPGIFENNDVLQQLRCGGVMEAIRISCAGYPTRKSFDEFVQRFSILEPKVLKCPDEITACKRLLDRANLKDYQIGKTKVFLRAGQMAELDACRAEVLGRSAIIIQKKGRSYICERQYKLLRFSAIELQRAVRGQIARHRYEGMRREAASLIIQKQCRMYISRTAYKTTYAKAVCIQAGMRGMTARNELRFRRRAQAATVIQSDYRCYLARNYFLKLKKASISVQCSWRRTNARRELRKLRMAAKEAKALEAAKINLEKQVEELNLCLESEKRMRVMYLFIEAKTQENEKLQCALQEMERQFEETKAQLIQEREAAKNVAAQTPTIQENHVVDNELVNKLTAENEQLKVTITQKVFGKFMSLAV 1256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01350 1256 PRINTS Myosin heavy chain signature 685 713 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo4g01350 1256 PRINTS Myosin heavy chain signature 345 364 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo4g01350 1256 PRINTS Myosin heavy chain signature 403 428 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo4g01350 1256 PRINTS Myosin heavy chain signature 738 766 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo4g01350 1256 PRINTS Myosin heavy chain signature 450 477 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo4g01350 1256 ProSiteProfiles IQ motif profile. 1013 1042 IPR000048 GO:0005515
Mepo4g01350 1256 Gene3D - 695 879 - -
Mepo4g01350 1256 MobiDBLite consensus disorder prediction 73 87 - -
Mepo4g01350 1256 Gene3D - 506 564 - -
Mepo4g01350 1256 Gene3D Myosin VI head, motor domain, U50 subdomain 566 857 - -
Mepo4g01350 1256 MobiDBLite consensus disorder prediction 1 24 - -
Mepo4g01350 1256 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 261 310 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mepo4g01350 1256 FunFam unconventional myosin-Va 1089 1136 - -
Mepo4g01350 1256 ProSiteProfiles IQ motif profile. 1086 1115 IPR000048 GO:0005515
Mepo4g01350 1256 SMART MYSc_2a 309 988 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo4g01350 1256 ProSiteProfiles IQ motif profile. 1109 1138 IPR000048 GO:0005515
Mepo4g01350 1256 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 289 1040 IPR027417 -
Mepo4g01350 1256 Pfam IQ calmodulin-binding motif 1016 1033 IPR000048 GO:0005515
Mepo4g01350 1256 Pfam IQ calmodulin-binding motif 1064 1082 IPR000048 GO:0005515
Mepo4g01350 1256 Pfam IQ calmodulin-binding motif 1088 1106 IPR000048 GO:0005515
Mepo4g01350 1256 Pfam IQ calmodulin-binding motif 1040 1059 IPR000048 GO:0005515
Mepo4g01350 1256 FunFam Class V myosin 695 831 - -
Mepo4g01350 1256 Coils Coil 1173 1211 - -
Mepo4g01350 1256 FunFam Myosin heavy chain 506 561 - -
Mepo4g01350 1256 MobiDBLite consensus disorder prediction 88 102 - -
Mepo4g01350 1256 Pfam Myosin N-terminal SH3-like domain 263 303 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mepo4g01350 1256 Coils Coil 1122 1166 - -
Mepo4g01350 1256 FunFam Myosin 2 566 684 - -
Mepo4g01350 1256 Gene3D - 923 985 - -
Mepo4g01350 1256 Gene3D - 264 308 IPR008989 GO:0003774|GO:0005524|GO:0051015
Mepo4g01350 1256 ProSiteProfiles IQ motif profile. 1063 1090 IPR000048 GO:0005515
Mepo4g01350 1256 MobiDBLite consensus disorder prediction 54 134 - -
Mepo4g01350 1256 Pfam Myosin head (motor domain) 317 975 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo4g01350 1256 CDD MYSc_Myo11 329 975 IPR036018 -
Mepo4g01350 1256 ProSiteProfiles Myosin motor domain profile. 315 987 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo4g01350 1256 Gene3D Kinesin motor domain 318 918 IPR036961 -
Mepo4g01350 1256 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1040 1137 IPR027417 -
Mepo4g01350 1256 ProSiteProfiles IQ motif profile. 1038 1064 IPR000048 GO:0005515
Mepo4g01350 1256 PANTHER MYOSIN 307 1090 - -
Mepo4g01350 1256 FunFam unconventional myosin-Va 1040 1088 - -
Mepo4g01350 1256 MobiDBLite consensus disorder prediction 103 126 - -
Mepo4g01350 1256 MobiDBLite consensus disorder prediction 1 25 - -
Mepo4g01350 1256 Gene3D - 1041 1087 - -
Mepo4g01350 1256 Gene3D - 1088 1138 - -
Mepo4g01350 1256 Gene3D - 990 1040 - -
Mepo4g01350 1256 SMART iq_5 989 1011 IPR000048 GO:0005515
Mepo4g01350 1256 SMART iq_5 1012 1034 IPR000048 GO:0005515
Mepo4g01350 1256 SMART iq_5 1060 1082 IPR000048 GO:0005515
Mepo4g01350 1256 SMART iq_5 1108 1130 IPR000048 GO:0005515
Mepo4g01350 1256 SMART iq_5 1037 1059 IPR000048 GO:0005515
Mepo4g01350 1256 SMART iq_5 1085 1107 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01350 Mepo-Chr4 17802424 17817483 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01350 258 1244 Myosins gene family AT1G04160 71.183 0.0 1465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01350 K10357 - gmx:100788123 1565.05