Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01336 ATGAGTTCCAACACCAAACAAACTCAGTTTCCCGCAGAGGTAGAAAAAGTTGATGATGCTTACCTCTTTGCGTTGTTATTATGTTTTAGTAGGATTTTTCCTGCAATACTAAATGCTGCTATTGATCTCAATTTATTTGATATCATAGCTAAGTTACAAAATTCAAGTGAACATTCTAGTTTTTCTGCTTCTCAAATTGCTTTTCAACTTCCAAATCAACACCCTGAATTGGCTGAGAGGCTTGAACGTATGTTGACTGTGTTGGCCAGTTACTCTCTTCTCACTTGCTCCATTCGTACCAATGAAGATGGTAAGAAAGAAAGAGTTTATGCTCTCTCATCAATTGGTCAATACTTTGCATTGGATAAAGATGGAGGCTCTTTGGGTCCACTCTCAGCATTAATCCATCGTGGATATCATAATGTTTGGTATGATGTAAAAGATGCAATTATAAACCCTAACAACAATGATCATTTTCATAAAGTTCATGGATTACCAGCTTATCAATATTTGGAAAAAAATCAAGAGCTAAATCAAATTTTTAACAAAGCAATGGCTCAATCTGGTCCATTAGAAATGAAAAGGATTCTTACATTATATAAAGGATTTGAGGGAGTCTCAACACTGGTTGATGTAGGTGGTGGAGTAGGGAATGCTTTGAAACAGATTATATCTGAATATCCTTCAATAAAAGGCATTAATTTTGATTTACCCCAAGTTCTTCAAGATGCACCAACTCATCCAGGGATAGAGCATGTTGAAGGAAATACGTTTGAAAGTGTTCCAAGTGGTGATGCCATCTTACTAAAGGTTAGTGAGTACATGAGAGGAGATATGGCTAGGGAGGAGGACGAGCGTCAACGGCGTATTAGAGAGAGTAAGACTCGCAAAGGTAAAGTAGCTATGACAAATAGTCATCGGAAGGAGTTGCAGGCTGAAAACCCGTATGTTCCAAAGACCCAGAGATGTAGGGACTTGAGGATAGGTGGAGAGGAGTCGGCGTCACACACACAAATGGATTACTCCCAGGTGGATGATCCGACACAAGCGCATGAGTATGTCGGGTATGCGGAGGGTTTTGCTGGATATGTTCGGATGGAGGAGGATGCTATGTTTTATCAGCTGGGGGAGGAGGCATCTCAGTATTTTGAGACAGAGAAGGTGGCACATGGCGAGGGTGATGAGGCCGAGGATGACTGTCATGTGCTTGCAGCTGCGCCTGAGTTCGAGCCTGGGCAACGTCTTCATGATGAGGTGGCACCTTCCGTGCCTATTGTAGGGCCTCCTTTTCCTGGAGGTCCTCGGACCACGACATTGTTGTCCGACTACGCGAGGCACGTGGCAATAAACATGTAA 1356 0.4233 MSSNTKQTQFPAEVEKVDDAYLFALLLCFSRIFPAILNAAIDLNLFDIIAKLQNSSEHSSFSASQIAFQLPNQHPELAERLERMLTVLASYSLLTCSIRTNEDGKKERVYALSSIGQYFALDKDGGSLGPLSALIHRGYHNVWYDVKDAIINPNNNDHFHKVHGLPAYQYLEKNQELNQIFNKAMAQSGPLEMKRILTLYKGFEGVSTLVDVGGGVGNALKQIISEYPSIKGINFDLPQVLQDAPTHPGIEHVEGNTFESVPSGDAILLKVSEYMRGDMAREEDERQRRIRESKTRKGKVAMTNSHRKELQAENPYVPKTQRCRDLRIGGEESASHTQMDYSQVDDPTQAHEYVGYAEGFAGYVRMEEDAMFYQLGEEASQYFETEKVAHGEGDEAEDDCHVLAAAPEFEPGQRLHDEVAPSVPIVGPPFPGGPRTTTLLSDYARHVAINM 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01336 451 Gene3D Vaccinia Virus protein VP39 121 304 IPR029063 -
Mepo4g01336 451 Gene3D - 2 119 IPR036388 -
Mepo4g01336 451 MobiDBLite consensus disorder prediction 279 303 - -
Mepo4g01336 451 FunFam Caffeic acid 3-O-methyltransferase 2 119 - -
Mepo4g01336 451 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 368 IPR016461 GO:0008168
Mepo4g01336 451 Pfam O-methyltransferase domain 143 271 IPR001077 GO:0008171
Mepo4g01336 451 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 136 271 IPR029063 -
Mepo4g01336 451 SUPERFAMILY "Winged helix" DNA-binding domain 17 122 IPR036390 -
Mepo4g01336 451 PANTHER O-METHYLTRANSFERASE 30 271 IPR016461 GO:0008168
Mepo4g01336 451 ProSiteProfiles IQ motif profile. 265 293 IPR000048 GO:0005515
Mepo4g01336 451 Pfam Dimerisation domain 36 89 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01336 Mepo-Chr4 17448020 17450369 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01336 4 302 Monolignol Biosynthesis Gene Families AT5G54160 40.728 3.36e-70 225