Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01330 ATGAGTTCCAATTCTAAGCAAAATAATCTTCCTACTAATGAGGTAGAAAAAGTTGATGATGCTTATCTTTCAGCATTGTTACTATGTTTTAGTAGGATTTTTCCTGCAATACTAAATGCTGCTATTGATCTCAATTTATTTGATATCATAGCTAAGTTACAAAATTCAAGTGAACATTCTAGCTTTTCTGCTTCTGAAATTGCTTATGAGCTTCCAAATCAACACCCTGAATTGGCTGAGAGGCTTGAACGTATGTTGACTGTGTTGGCCAGTTACTCTCTTCTCACTTGCTCCATTCGTACCAATGAAGATGGTAAGAAAGAAAGAGTTTATGCTCTCTCATCAATTGGTCAATACTTTGCATTGGATAAAGATGGAGGCTCTTTAGGTCCACTTTCTACATTAATCCATAGAGGATGTAACAGTGTTTGGGGTGATGCAAAGGATGCAATTTTGGATCCTGATGTCAAAAATCTTTTCCAAAGTATCAATGGGACATCATTTTATCAATACACCAAGACAAACAAAGAATTGAATGATGTTTTTAACAAAGCAATGGGACAATCTGGACCGTTGGAAATTAAAAGGATCCTCAAGTTATATAAAGGTTTTGAAGGAGTCTCAACTTTGGTTGATGTTGGAGGTGGAGTAGGAGAAACCCTAAAACTCATTCTCTCTCAATATCCTTCAATTAAGGGAGTTAATTTTGACTTGCCACAAGCTGTTCAAGATGCACCTACTTATCGAGGGCTAGAGCATGTTGGAGGAGATATGTTTGAAAGTGTTCCAAGTGGTGATGCCATTTTACTAAAGCTTGTATGTCATAATTGGCCAGATGAAGAATGTGTGAAGTTTTTAAAAAATTGCCACAAAGCTTTACCAAAACATGGAAAGGTGATTGTTTTGGATTATATAATTCCAGAGGTGCCAAACCCTAGCAATATGTCTAAGCATGCTTGTGCTATTGACAATCTCATGTTTTTAGTAACAACTGGAAAGGAAAGAACTGAAGAAGAATTTGAAAGCTTATGTAAGAGAGCTGGATTTTCCAAATTTCATGTGGCTTGCAGTGATGTCTCAGCCATGTCTGGAGTGATGGAGTTTTATAAATAA 1113 0.3639 MSSNSKQNNLPTNEVEKVDDAYLSALLLCFSRIFPAILNAAIDLNLFDIIAKLQNSSEHSSFSASEIAYELPNQHPELAERLERMLTVLASYSLLTCSIRTNEDGKKERVYALSSIGQYFALDKDGGSLGPLSTLIHRGCNSVWGDAKDAILDPDVKNLFQSINGTSFYQYTKTNKELNDVFNKAMGQSGPLEIKRILKLYKGFEGVSTLVDVGGGVGETLKLILSQYPSIKGVNFDLPQAVQDAPTYRGLEHVGGDMFESVPSGDAILLKLVCHNWPDEECVKFLKNCHKALPKHGKVIVLDYIIPEVPNPSNMSKHACAIDNLMFLVTTGKERTEEEFESLCKRAGFSKFHVACSDVSAMSGVMEFYK 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01330 370 Gene3D Vaccinia Virus protein VP39 127 370 IPR029063 -
Mepo4g01330 370 FunFam Caffeic acid 3-O-methyltransferase 2 120 - -
Mepo4g01330 370 Pfam Dimerisation domain 37 90 IPR012967 GO:0046983
Mepo4g01330 370 PANTHER O-METHYLTRANSFERASE 31 358 IPR016461 GO:0008168
Mepo4g01330 370 FunFam Uncharacterized protein 122 370 - -
Mepo4g01330 370 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 141 358 IPR029063 -
Mepo4g01330 370 PIRSF O-mtase 2 370 IPR016461 GO:0008168
Mepo4g01330 370 Pfam O-methyltransferase domain 144 350 IPR001077 GO:0008171
Mepo4g01330 370 Gene3D - 1 120 IPR036388 -
Mepo4g01330 370 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 370 IPR016461 GO:0008168
Mepo4g01330 370 SUPERFAMILY "Winged helix" DNA-binding domain 18 123 IPR036390 -
Mepo4g01330 370 CDD AdoMet_MTases 209 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01330 Mepo-Chr4 17357799 17361888 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01330 19 356 Monolignol Biosynthesis Gene Families AT5G54160 45.000 1.73e-101 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01330 - - aprc:113869089 538.88