LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo4g01325	ATGTCTGGCGTTCCATTTCCCTCCAACCTTTTACCATCTGATTCGAGTCCCGAATGGCTAAGCAAAGCCGACAACGCATGGCAACTAATGGCCGCAACATTAGTCGGCATGCAAAGTGTTCCGGGACTAATAATTTTATACGGTGGCGCGGTTAAAAAGAAATGGGCAGTGAATTCAGCATTCATGTCACTCTATGCATTTGCATGTGTGTTTTTCTGTTGGGTTTTTTGGGCTTATAGAATGTCATTTGGTGATAAACTTTTTCCATTTTGGGGTAAACCAGCACTTGCACTTGATGAACAGTATCTTTTCAAGCCAGCTTTCTTAGGAGCATTTCCAAATGCTACTATGATTTATTTTCAATGTGTTTTTGCTGCTATTACTTTGATTTTGATAGCTGGTGCTGTGTTGGGGAGAATGAACTTCTATGCTTGGATGATGTTTGTGCCTTTATGGCTCACTTTTTCATATACTTTTACTGCTTTTAGTATTTGGAGTACTAATGGATTTCTTGCCAAAATGGGGATTATTGATTACTCTGGTGGTTATGTGATTCATTTGTCTTCTGGGGTTGCTGGATTTACTGCTGCTTATTGGGTTGGACCACGTCTAAACAAAGACAGGGAAAGGTTCCCACCAAACAATCTCCTTCTTATGTTAGCAGGAGCAGGGCTCTTATGGATGGGATGGACAGGATTCAATGGAGGAGATCCTTACTCAGTTGGCTTGGATGCTTCATTGGCTGTCTTGAACACACATGCTTGCACTGCTACTAGCTTGCTTACTTGGGTCTTCCTTGATGTCATTTTCTTCAGAAAGCCTTCTGTTATTGGTGCAGTTCAAGGCATGATTACTGGTTTGGTTTGCATTACCCCTGCTGCAGGAGTTGTACAAGGATGGGCAGCACTAATAATGGGGTTGTTCTCTGGCTCAATTCCATGGTTTACCATGATGGTAATCCACAAAAGATCAAAGCTACTTCAAAAAGTAGATGACACAATGGCAGTGTTACACACTCATGCAATTGCAGGAAGTCTTGGAGGAATTCTCACTGGTCTCTTTGCTGAGCCAAAAATGAACTATTTGTTCTATGGTGCTTATAATAAATATGTTGGTCTATTTTATGGATTACAAATGAACATGGCTAGTACTGGACTCAGACAAATAGGAATCCAACTCCTTGGAATTTTGTTTGTTATCTTTGTTAATGTTTTAAGTACAAGTTTGATATGTCTCTTCATTCGACTTTTCGTTCCTTTGAGAATGTCCGAAGAGGATATGGAAATCGGTGACGAGGCTGCTCATGGTGAAGAAGCTTATGCAATTTGGGGTCAAGGTGATAAACATGAGAATTCGAGTTCAAAATATGGAAGTTCTTTGTATGAAGATGTTGAAGTTGCGGCCACCACGAAGAATAAGCGTGGTAGCCAGATTGAGATGATGTGA	1446	0.4073	MSGVPFPSNLLPSDSSPEWLSKADNAWQLMAATLVGMQSVPGLIILYGGAVKKKWAVNSAFMSLYAFACVFFCWVFWAYRMSFGDKLFPFWGKPALALDEQYLFKPAFLGAFPNATMIYFQCVFAAITLILIAGAVLGRMNFYAWMMFVPLWLTFSYTFTAFSIWSTNGFLAKMGIIDYSGGYVIHLSSGVAGFTAAYWVGPRLNKDRERFPPNNLLLMLAGAGLLWMGWTGFNGGDPYSVGLDASLAVLNTHACTATSLLTWVFLDVIFFRKPSVIGAVQGMITGLVCITPAAGVVQGWAALIMGLFSGSIPWFTMMVIHKRSKLLQKVDDTMAVLHTHAIAGSLGGILTGLFAEPKMNYLFYGAYNKYVGLFYGLQMNMASTGLRQIGIQLLGILFVIFVNVLSTSLICLFIRLFVPLRMSEEDMEIGDEAAHGEEAYAIWGQGDKHENSSSKYGSSLYEDVEVAATTKNKRGSQIEMM	481

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo4g01325	481	SUPERFAMILY	Ammonium transporter	19	422	-	-
	Mepo4g01325	481	PRINTS	Rhesus blood group protein signature	121	137	IPR002229	GO:0005886
	Mepo4g01325	481	PRINTS	Rhesus blood group protein signature	217	235	IPR002229	GO:0005886
	Mepo4g01325	481	PRINTS	Rhesus blood group protein signature	248	270	IPR002229	GO:0005886
	Mepo4g01325	481	Pfam	Ammonium Transporter Family	26	440	IPR024041	GO:0008519\|GO:0016020\|GO:0072488
	Mepo4g01325	481	PANTHER	AMMONIUM TRANSPORTER MEP2	8	452	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Mepo4g01325	481	ProSitePatterns	Ammonium transporters signature.	178	203	IPR018047	GO:0008519\|GO:0016020\|GO:0072488
	Mepo4g01325	481	FunFam	Ammonium transporter	9	443	-	-
	Mepo4g01325	481	Gene3D	Ammonium transporter AmtB like domains	11	444	IPR029020	-
	Mepo4g01325	481	NCBIfam	ammonium transporter	24	440	IPR001905	GO:0008519\|GO:0016020\|GO:0072488

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo4g01325	Mepo-Chr4	17298354	17301482	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo4g01325	115	467	Inorganic Solute Cotransporters	AT2G38290	62.040	1.38e-143	414

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo4g01325	K03320		-	gmx:100787856	841.647

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