Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01321 ATGAGTGAGGGGCCCTCAGAACCTCGTCATGTTCCCTTGATTAATCTTGAGGATAGTGATGATGATGTCATTGAATCTTCACCTAGATCTTTTGCTCAGGCAAGCGCAAGGAGAAATCGAAGAAGGATGGCAACTGGCTCGAATTTGGGAAGTCAAACTATACCAACTTATGCTATGCACACCAGAGAGCAACACAGAATCGAACCAATTGGTGATGTTTATATAAATTTGGAAGTTAATACTAGTGGGGAGGCTAAGAATGCCAAAAATTCAGCTGAAACTAAGAAAGAAGCCTTAGAGCCTAATATTGAAGCACCTGAACCTCCAGAGGAACCTAGATGCCCAATATGTATGGATCCTTTTGTGGAAGAAATGACAACCAGGTGTGGACATATTTTTTGCAAGAATTGCATCAAAAATGTAATAAGAATACAAGGCAAATGTCCTACTTGTAGGAAAAAGGTTACTTCAAGACAGCTAATAAAGGTGTTTCTTCCATCTTTCGGTTGA 510 0.4 MSEGPSEPRHVPLINLEDSDDDVIESSPRSFAQASARRNRRRMATGSNLGSQTIPTYAMHTREQHRIEPIGDVYINLEVNTSGEAKNAKNSAETKKEALEPNIEAPEPPEEPRCPICMDPFVEEMTTRCGHIFCKNCIKNVIRIQGKCPTCRKKVTSRQLIKVFLPSFG 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01321 169 PANTHER ELFLESS, ISOFORM B 11 166 - -
Mepo4g01321 169 MobiDBLite consensus disorder prediction 26 55 - -
Mepo4g01321 169 SMART ring_2 114 151 IPR001841 -
Mepo4g01321 169 ProSiteProfiles Zinc finger RING-type profile. 114 152 IPR001841 -
Mepo4g01321 169 MobiDBLite consensus disorder prediction 1 55 - -
Mepo4g01321 169 SUPERFAMILY RING/U-box 108 157 - -
Mepo4g01321 169 ProSitePatterns Zinc finger RING-type signature. 129 138 IPR017907 -
Mepo4g01321 169 MobiDBLite consensus disorder prediction 89 107 - -
Mepo4g01321 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 167 IPR013083 -
Mepo4g01321 169 MobiDBLite consensus disorder prediction 83 110 - -
Mepo4g01321 169 Pfam Zinc finger, C3HC4 type (RING finger) 113 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01321 Mepo-Chr4 17173107 17177656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01321 6 167 C3H Transcription Factor Family AT3G07200 39.024 6.24e-31 108