Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01306 ATGTCATTTTATAAGCCTAGAAAGTTCTTCAAGATAATGCGAAATCAAGAACTGCAAAATGGAGAGCTTAGGGTTCCCAAATATTTTGTGAATCTACATTGGAAAAATGTACCAAATCCAGTAGTCTTTACTCTCCCAAATGGTGCTAAACAAGATGTATTTTGGGTGGAGCGTAATGGTGATATTTGGTTTCAAAGAAATTGGGAAAAAATTGGGAAATCTCTTATACGTGGACTTGTTCTAGTTTTTAAATATAAAGGAGGATCATGTTTCAAAGTTGAAATATTTGGTCACAATACATTGGAAATAGACTATTCCAATATAAAAGTTGAAGCTGAAGAAGTTGTTACAGTGAGTGATGACAATGTTACTAATATTAATGGTGCTGGTACATCTCAAAGGAAAAAAGGTGGCAAGAGAAAAATGAATATGGATCTTGATGCTAATCGGAAAAAAATCAAAGGTAGTAATAGAGGAGGCAAGATTAAGAAGGCTAAAAATTGCTTAAGAAATGAAGCTGTTGAAGAGACAGCAAGAATTTATCATCCTTTGGAAAATCCCAGTTTTGAACTTGAAATGTCACAATCTTACGCCAAAGGATGTTATTTGAGGATACCAAGGGATTTTTCGAGAAAATACTTAAAAAAGTTGGAAGGGACAGGAAGATTTAGAGTTGGTGAAGACATGGCTATAGAAGTGAAGTTGAATTTTGATGATGCCACTAAATCATCTACTGTGACCACTGGTTGGAAGACATTTAGCAATAAATATAATTTGCAAGTTGGTGATGTTATAAAGAAGGGATCTCTTGTAGTGATAACAATGCAAAGAGCAAAGACATTAAAGGAACTTCCAGTTCTAGGAGCTGCCCAAAAATACATCTACCCAGGGGATGTACCGATGGAGTTTATGAAAAGAGGATGTCATGAAAATTTGGTGGAGTTGAAAATGGAGGGACAATCTTGGTTCGTAAAAGTGAACTATTATCGTAGTATTCATGGTTGTAGGTTCTCTGCTGGTTGGAGACAATTCAAAAAGGAATGCAAAGTGGAGACTAGAGATACTTGTCTCTTGAAGATGATATGA 1086 0.3527 MSFYKPRKFFKIMRNQELQNGELRVPKYFVNLHWKNVPNPVVFTLPNGAKQDVFWVERNGDIWFQRNWEKIGKSLIRGLVLVFKYKGGSCFKVEIFGHNTLEIDYSNIKVEAEEVVTVSDDNVTNINGAGTSQRKKGGKRKMNMDLDANRKKIKGSNRGGKIKKAKNCLRNEAVEETARIYHPLENPSFELEMSQSYAKGCYLRIPRDFSRKYLKKLEGTGRFRVGEDMAIEVKLNFDDATKSSTVTTGWKTFSNKYNLQVGDVIKKGSLVVITMQRAKTLKELPVLGAAQKYIYPGDVPMEFMKRGCHENLVELKMEGQSWFVKVNYYRSIHGCRFSAGWRQFKKECKVETRDTCLLKMI 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01306 361 Gene3D - 169 267 IPR015300 -
Mepo4g01306 361 Gene3D - 268 361 IPR015300 -
Mepo4g01306 361 SUPERFAMILY DNA-binding pseudobarrel domain 5 99 IPR015300 -
Mepo4g01306 361 SMART B3_2 9 99 IPR003340 GO:0003677
Mepo4g01306 361 SMART B3_2 189 279 IPR003340 GO:0003677
Mepo4g01306 361 SUPERFAMILY DNA-binding pseudobarrel domain 311 360 IPR015300 -
Mepo4g01306 361 PANTHER B3 DOMAIN-CONTAINING 4 265 - -
Mepo4g01306 361 CDD B3_DNA 187 265 IPR003340 GO:0003677
Mepo4g01306 361 Gene3D - 3 100 IPR015300 -
Mepo4g01306 361 SUPERFAMILY DNA-binding pseudobarrel domain 184 265 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01306 Mepo-Chr4 16790259 16792899 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01306 6 264 B3 DNA Binding Superfamily AT3G18990 25.000 2.56e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01306 - - mtr:120578013 477.633