Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01304 ATGTCATTACATCATCCAAAAGAGTTCTTGAAGATAGTTCAAAATCATGAACTACATAAAGGAGAGCTTAAACTTCCCAAAATATTTGTGGAGAAATATTGGAAAAGAATACCAAATCCAGTAATTCTTAGACTTCCAAATGGTGCTCAACAGGAAATATTTTGGGTGGGGCGTGACGGTGATATTTGGTTTAAGAGAAATTGGGAAAATTTTGCAAAGTCTCTAAAATATGGATATGCTTTAGTTTTCAAATATATAGGTGGCCCATATTTTAAGGTTAAGATTTTTGGTCACAATACATTGGAAAAAGACTATTCCAATATAAAATTCATAGATGAAAGTTGTGAAGGTAGAGAAGAAGTTCAAGAAGTTGTTGAACTGAGTGATGACAAAGTTACTAATAGTGCTGGCACATCTCAAAGGAGAAAAAATGGCAAGAGAAAAATTAATCAGCAAAAAATCAATGGTAATAGGAGAGGAGGCATGATTAAGAAGGCTAAAAAAAGCTCAACAATTAGTGAGAGAGACAATAATGAGAATCCAAGTTTTGAACTTGAATTGTCACATTCTTACGCCCATGGCTATACGTTGAGGATACCAAGTGACTTTTCAAGAACATATTTGAATGAGTGCCTTAAAGGGTCATCTGCAAGCATTAGAGTTGGTGAGAACATGCCTATGAAAGTGAAGGTGATGTTTCAAGATGTCAAGTATAATAGAACATGTTTGGTGACCAATGGTTGGAAGCCATTTGCCAAAAAATATAACTTACAAGTTGGTGATAAATGTAAATTTGTGATGACTCAACGAGAACCACTTTCATTCACCATGACTATTACCCAAGCCAAAGGTTATGAAGGAATGGTCTCTTGTGATGATAATGTTGGGAAGAGAAGAGGCATTGAAGGAAGTTCAAGGAGCTGCCATGTTGTCTCGAAAGACTTAGAAGGTGGTAATGTGATGGAACCGAACACAATCAAGATTCGTGTGAACTCTACTTACCCGGAAAAATTCAAATCGCACACTCGGGCTGTGTATAGCCTTGCACTCATCGTGTGTGCTGTTCAACACATGGCCAACTTCATCTTAAAGATGCGCATCTCGGTTCCTGTCACGGACGTTGGATGTGCTTCCGTGACATTCTTCCTCTTCTGCTCATCAGTATGTGCATGCATCTGA 1179 0.3766 MSLHHPKEFLKIVQNHELHKGELKLPKIFVEKYWKRIPNPVILRLPNGAQQEIFWVGRDGDIWFKRNWENFAKSLKYGYALVFKYIGGPYFKVKIFGHNTLEKDYSNIKFIDESCEGREEVQEVVELSDDKVTNSAGTSQRRKNGKRKINQQKINGNRRGGMIKKAKKSSTISERDNNENPSFELELSHSYAHGYTLRIPSDFSRTYLNECLKGSSASIRVGENMPMKVKVMFQDVKYNRTCLVTNGWKPFAKKYNLQVGDKCKFVMTQREPLSFTMTITQAKGYEGMVSCDDNVGKRRGIEGSSRSCHVVSKDLEGGNVMEPNTIKIRVNSTYPEKFKSHTRAVYSLALIVCAVQHMANFILKMRISVPVTDVGCASVTFFLFCSSVCACI 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01304 392 CDD B3_DNA 7 96 IPR003340 GO:0003677
Mepo4g01304 392 SUPERFAMILY DNA-binding pseudobarrel domain 7 99 IPR015300 -
Mepo4g01304 392 ProSiteProfiles B3 DNA-binding domain profile. 182 283 IPR003340 GO:0003677
Mepo4g01304 392 PANTHER B3 DOMAIN-CONTAINING 5 269 - -
Mepo4g01304 392 Pfam B3 DNA binding domain 185 279 IPR003340 GO:0003677
Mepo4g01304 392 Gene3D - 162 285 IPR015300 -
Mepo4g01304 392 MobiDBLite consensus disorder prediction 132 180 - -
Mepo4g01304 392 SUPERFAMILY DNA-binding pseudobarrel domain 178 286 IPR015300 -
Mepo4g01304 392 Gene3D - 2 100 IPR015300 -
Mepo4g01304 392 SMART B3_2 9 99 IPR003340 GO:0003677
Mepo4g01304 392 SMART B3_2 183 283 IPR003340 GO:0003677
Mepo4g01304 392 CDD B3_DNA 181 279 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01304 Mepo-Chr4 16762271 16765311 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01304 9 303 B3 DNA Binding Superfamily AT3G18990 22.071 4.67e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mepo4g01304 B3 6.5e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01304 - - cam:101508042 338.961