Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01303 ATGTCTTCTCAGATTCAGAGTAACGGTGTCCATTTTTTTAAGGTTATTCTTCAAAGTACCCTTCAAGAAGAAAAACTGAGTGTGCCTATAACTTTTGTGAAAAGGTATTGGAAAGGAATAACAAACCCAGTTACTTTAAGATGCGGATTAGAAATAAAATACCCGTCAAGAGAAACTAGGGAAGAATCTGAAGAGAGTGATAGTTCTTTGAAAATTATTGAGAATCCTTCGTCATCACGAGGTGTTGCTACTAAATTCTTTTTGGTGATTTTAGCAGGAAGTAGTTGTGATGATATTAAGCATAGAAGTAGAATTTTGTACCAGAAAGTGAAGAAAAAATTCGACTCTGATAAGGACTTTTTTGCATGTATGATCCTAAAGACATACATTGATAGAGATCTCTTGGTCATACCAAATGAATTTGTCAAGAAACATATGCACATGATGGAAGGAAGAGATGATGCTACCCTTTTTGTTGACCAAGATAAATGGAATGTGAAGCTCACATTAAATAAACAATCTGCACTAACTTGTGGTTGGAGAGAATTCCGTGAAGAGAATAATTTGAAATTTGGTGATGTTTGTGTTTTTGTGCTAAACAAAGGCAAAGAAACAGTTCCATTTCAAGGTTGGCTTGAATTTGTGAAGGGGTGTGAATTGAAAAAGGGTGATACTTGCCTATTGAAGATGGTTGAAAAGCTTGGATTTGATGTTGTAATTTCAAGAAGTTAA 732 0.3456 MSSQIQSNGVHFFKVILQSTLQEEKLSVPITFVKRYWKGITNPVTLRCGLEIKYPSRETREESEESDSSLKIIENPSSSRGVATKFFLVILAGSSCDDIKHRSRILYQKVKKKFDSDKDFFACMILKTYIDRDLLVIPNEFVKKHMHMMEGRDDATLFVDQDKWNVKLTLNKQSALTCGWREFREENNLKFGDVCVFVLNKGKETVPFQGWLEFVKGCELKKGDTCLLKMVEKLGFDVVISRS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01303 243 Gene3D - 101 204 IPR015300 -
Mepo4g01303 243 SMART B3_2 120 215 IPR003340 GO:0003677
Mepo4g01303 243 Gene3D - 205 243 IPR015300 -
Mepo4g01303 243 CDD B3_DNA 120 205 IPR003340 GO:0003677
Mepo4g01303 243 Pfam B3 DNA binding domain 120 204 IPR003340 GO:0003677
Mepo4g01303 243 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 102 201 IPR044837 -
Mepo4g01303 243 SUPERFAMILY DNA-binding pseudobarrel domain 114 203 IPR015300 -
Mepo4g01303 243 SUPERFAMILY DNA-binding pseudobarrel domain 208 242 IPR015300 -
Mepo4g01303 243 ProSiteProfiles B3 DNA-binding domain profile. 120 214 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01303 Mepo-Chr4 16752684 16754534 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01303 62 206 B3 DNA Binding Superfamily AT3G18990 27.211 3.79e-08 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mepo4g01303 B3 1.8e-13 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01303 - - mtr:112418315 282.337