Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01301 ATGTCATGTCAACATGTTCCAGATTTTCATAGAATAGTATTGCAAGATAAGAAACTTAGGGTTCCTAAGTTATATGTGGAGAAATATTGGAAAGGAATATCAAACCCTATATTCCTTAAGTTTCCAAACGGTGTTGAACAAAAAATATTTTGGGTGGAGAGTAATGGTGATATTTGGTTTCAAAAGAATTGGGAAAGTTTTGCTAAGTCTTTCAAATATGGATATCTCTTGACTTTCAAATTCATTGGTGGATCATATTTTAAGGTTAAGATATTTGGTGCCAATACTTTAGAAATAAATTACTCCAAAATCAAATCCGTTAATGATGAAGGTGCTGAAGCCACAAAAGAAGGTAAAGAAAATGATGAATCAAGTGATGCTGAAGCCACTGAAAAAGGTGAAGAAAGTGACGAATCAAGTGATGAAGCTAGTGATGAGAGTGTTGAAATGCCAAAGCAAGCTCAAAGAAATGGCAAGAGAAAAGTGAGTATGGATTTTGACACCACCCAACCAAAATTCTCAGATAGTAACAAAGTGGCCATGGTAAAGAAGGCTAGAAAATACGTAACATCTGAAGCTGTTAATGAGAATCCCTCTTTTGAAGTTATAATGACACAATCTTACGCCAATGGCTATTTCTTGTGGTTACCAAGTGAGTTTTCAAGAGAACACTTGAACGATTTTAAAGGGACTGCAACAGTAAGGGTTGGTAAAGAAAGGACTGTGAAAGTGAGTTTGAGGTATTATGGTACCAAGAAAAAATATGAAGGTCCTGATGTGATGAAGCATAACACATTCAAGGTTTTGGTGAAGAACAATGCCCCGGTTCTTCTCCAACTTGATTCCTTGGAAACAAGGCTTGAGGATCTTTTAGTAAATGCAAATATATTGTTTGGTTTTAGCCATGGTGAAATTATTCATCTTCTTGGGTTTTCTCCCTTTGGTTTGTTTTAG 954 0.3553 MSCQHVPDFHRIVLQDKKLRVPKLYVEKYWKGISNPIFLKFPNGVEQKIFWVESNGDIWFQKNWESFAKSFKYGYLLTFKFIGGSYFKVKIFGANTLEINYSKIKSVNDEGAEATKEGKENDESSDAEATEKGEESDESSDEASDESVEMPKQAQRNGKRKVSMDFDTTQPKFSDSNKVAMVKKARKYVTSEAVNENPSFEVIMTQSYANGYFLWLPSEFSREHLNDFKGTATVRVGKERTVKVSLRYYGTKKKYEGPDVMKHNTFKVLVKNNAPVLLQLDSLETRLEDLLVNANILFGFSHGEIIHLLGFSPFGLF 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01301 317 CDD B3_DNA 13 92 IPR003340 GO:0003677
Mepo4g01301 317 SUPERFAMILY DNA-binding pseudobarrel domain 196 251 IPR015300 -
Mepo4g01301 317 MobiDBLite consensus disorder prediction 127 144 - -
Mepo4g01301 317 MobiDBLite consensus disorder prediction 112 170 - -
Mepo4g01301 317 PANTHER B3 DOMAIN-CONTAINING 5 225 - -
Mepo4g01301 317 Gene3D - 175 273 IPR015300 -
Mepo4g01301 317 MobiDBLite consensus disorder prediction 112 126 - -
Mepo4g01301 317 SUPERFAMILY DNA-binding pseudobarrel domain 12 95 IPR015300 -
Mepo4g01301 317 Gene3D - 1 96 IPR015300 -
Mepo4g01301 317 MobiDBLite consensus disorder prediction 145 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01301 Mepo-Chr4 16725981 16728502 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01301 7 255 B3 DNA Binding Superfamily AT3G18990 26.846 2.59e-19 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01301 - - mtr:112418291 436.032