Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01297 ATGTCGTTTCAACAACACGGCACTGGCAGCAGCATTCACAATGGGCGTGGTAGTGAAGCTAAAGGAATGCATTTCTATTTGCATGTTCAACAATGCGACCTTCAACACAAACAACTCATGATTCCAAGGAATTTTGTAGAGAGATATTGGAAAGATGTACCAAATCCAATATCCCTTAAACTTCCAAATGGGTCAGCATGCAAAATGAATTGGGTGCAAAGCGGTGATGGTATTTGGCTTCAGAATTGGAAGAGGTTTGCATGGTCGCTCCGATGTGGAGATCTTTTAGTTTTCCAATACAAAGGAGGGTCAGATTCTCATGTCATTATATTAGATGATAGTAAATTAGAAATTGACTATTCAAGTATGAGATGCAACGACGATCAAGAAAATACTAAAGAGAGTGATGATGATGACGACGACAATGATTAG 432 0.3912 MSFQQHGTGSSIHNGRGSEAKGMHFYLHVQQCDLQHKQLMIPRNFVERYWKDVPNPISLKLPNGSACKMNWVQSGDGIWLQNWKRFAWSLRCGDLLVFQYKGGSDSHVIILDDSKLEIDYSSMRCNDDQENTKESDDDDDDND 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01297 143 SUPERFAMILY DNA-binding pseudobarrel domain 23 121 IPR015300 -
Mepo4g01297 143 Gene3D - 17 115 IPR015300 -
Mepo4g01297 143 CDD B3_DNA 36 112 IPR003340 GO:0003677
Mepo4g01297 143 PANTHER B3 DOMAIN-CONTAINING 16 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01297 Mepo-Chr4 16690612 16691938 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01297 25 131 B3 DNA Binding Superfamily AT3G18990 30.000 2.23e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01297 - - mtr:25482716 261.151