Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01296 ATGCTTCATCTTCCAAGCATTATGTCTTTTCAACAACACACCGGCGTTCACTATGGCCGTGGAAGTGATGCTAAGGGAATGCATTTCTACCTAAATATTGAACTTCGTGAGTTGCAAGATCAAGAGCTAATGATTCCAAGGAATTTTGTAGAGAGATATTGGAAAGATGTATCAAATCCAATATCCCTTAGACTTCCAAATGAGTTTGAGTGCAAAATGTTTTGGGTACAACGTGGTACTAACAATGGAAGCATGACTAAGAAGGCTATGGGATGTTCAATAATTGGGGCAGTTAATGAGAAATCCAATAATGTGAATCCAAGTTTTGAACTTAAATTATCACAATCTTATGCTCAAGGCCATTTATGTTGGATACCAACTAAGTTTTCAAGAGAATACTTGAAGGGGTTCAAAGGGATTGCAAGGTTAAGGGTTGGTGAGGATAAAGCTTGGAAGGTGAATGTGAAGTTTGATTATGTTAAAAGAGGTTCTATTCTGAATGTAGGTTGGAATTTATTTGCCAAAGATAATAACTTGCAAGTTGGTGATGTGTGCAAGTTTGAGATGACTCAATCCGAGCCACTTTCATTTAATATTTCTATTTCTCGAGTTAGAGAGGATCCAAGCCCTTACAAATTGCAAGGTTATGAAAAGGAAATATCTCCAACAAATTCAGGAGGTTCTAATGTGATGAATCTTAAGACATTTGAGCTTTTTGTGAATTCCTCCTACCCGCTATTTGAAATTCCTTCTTCAAAATTTCCCACATATTCCATATCTTCTACTGCCGTTGTCTCTAATTTTTCTTGGACTCCTTGCTCTTCTGCATGTCCACAACCTTGGCAGGGATGA 852 0.3744 MLHLPSIMSFQQHTGVHYGRGSDAKGMHFYLNIELRELQDQELMIPRNFVERYWKDVSNPISLRLPNEFECKMFWVQRGTNNGSMTKKAMGCSIIGAVNEKSNNVNPSFELKLSQSYAQGHLCWIPTKFSREYLKGFKGIARLRVGEDKAWKVNVKFDYVKRGSILNVGWNLFAKDNNLQVGDVCKFEMTQSEPLSFNISISRVREDPSPYKLQGYEKEISPTNSGGSNVMNLKTFELFVNSSYPLFEIPSSKFPTYSISSTAVVSNFSWTPCSSACPQPWQG 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01296 283 CDD B3_DNA 107 203 IPR003340 GO:0003677
Mepo4g01296 283 ProSiteProfiles B3 DNA-binding domain profile. 108 205 IPR003340 GO:0003677
Mepo4g01296 283 Pfam B3 DNA binding domain 113 203 IPR003340 GO:0003677
Mepo4g01296 283 SMART B3_2 109 205 IPR003340 GO:0003677
Mepo4g01296 283 SUPERFAMILY DNA-binding pseudobarrel domain 106 199 IPR015300 -
Mepo4g01296 283 Gene3D - 95 207 IPR015300 -
Mepo4g01296 283 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 101 209 IPR044837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01296 Mepo-Chr4 16665067 16670570 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01296 105 206 REM Transcription Factor Family AT1G49480 32.039 1.01e-10 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mepo4g01296 B3 1.6e-13 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01296 - - mtr:25482710 286.189