Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01293 ATGAATCCTCATAATTCGAAACAAATCTTTCCATCAGCACCACGTGGTTTCTCTTTACCAAACCCAAACCTCAACCTAAACCTAAATCAAAGTCTAAACCTAGAACAACCTAACACCACCACCACCACCCCAAGTATGGCGATGATCCCACTTGTTCGAATGACGGATCTAGGGTTACCGAAAAAGCGTCAAATGCGGGACGTTGTTCGAAGGACTAGGATGGTCTATGATTCGGTTCATGTTTTGGCTATGGCTAAAGATAAAGGATATTTTAATGCTAGAAGAGGGAGAAGTGATTTGAAAGCTTCTGCCATCATGAGGAGTCGAGGATTGTGGCTGAATCGCAATATGAGGATTGTTGGTGCGATTCCCGGAATTTGTATTGGTGATGTGTTTTTGTATAGGATGGAGTTGTGTGTGGTTGGTTTACATGGTGAACCACAAGCTGGGATCGATTATTTGCCTGGGAGTATGAGTTCAAATGGCGATCCGATTGCTACTAGTGTGATTGTTTCTGGTGGATATGAGGGTGATGTTGATGAAGGTGATGTTATTATTCTCTCGGGTCATGGCGGGCAAGATAAGAATCGGAAGCAAGTTTTTCATCAGAAGCTGGAAGAAGGGGATCTTGCTATGGAGAGGAGTATGCATTATGGGATTGAGGTAAGGGTCATTCGCGCTGTGAGGTATGAAGGTACTTCTTCGACTTCAGGTAAGGTTTATGTTTATGATGGTTTGTATAGGATTGTTGAAAGCTGGTGTGATGTTGGTAAAAGTAGTTTTGGTGTTCTTAAGTTTATGTTGTCGAGGATTGATGGTCAAGCTAAGATGGGTAGTTTGGTTTTAAAGGAGGCTTTTTTGCGTAGGAACGATCCTTCGTGTTATAAACCTATGTGTATTATATCTCCTGATATTTCCAACGGGATGGAGCGTGTCGGTATAAGGCTTTTTAATGATATTGATGAATGTAAAGATCCGATGTATTTTGAGTATCTTCCTAGGGCTACTCTTTTTCCCTTTGAGTTTCATCCAAGGGGGAATGAGACAGGTTGTAAATGTGTGGGCAGTTGCGGGGAAGGATGCATTTGTTTCATGAGAAATGGTAACATCTTTCCTTATAGTCAAAGCGGGCTTCTCTTGAAAGGAAAGCCGGTCATTTTTGAATGTGGTCCTGATTGTAGTTGTCCGCCTCATTGTCGGAACCGTGTTACGCAACAAGGGATTAATCATAGGTTGGAAGTGTTTAGATCTTTGGAAACTGGTTGGGGAGTTAGGTCATTTGACCTTATTCAAGCTGGCACATTTATATGCGAGTACAGTGGGGTTGTTCTAACAAGGGAGCAAGCAGAAATTATGACTATGAATGGTGATTCATTAATATATCCAAATCGTTTTTCAAATAGGTGGACAGAATGGGGTAATTTATCTCTAATAGATGATGGTTATGCGCTTCCTTCGTATCCATCAATTCTTCCTTTGAATTTTGCTTTGGACGTTTCTAGAATGAGGAATGTGGCTTGCTATATAAGTCATAGCTCAACTCCAAATATGATGGTTCAGTTTGTTGTGCATGATCGCAATAATCAATTTTACCTCAAAACTATGTTGTTTGCGATGGAGAGCATCCCTCCATTAAGAGAGTTCAGCCTTGATTATGGTGTATCTGATGATGTGTTGATTCGCGAGCTCGCAATGCACAATTGA 1704 0.412 MNPHNSKQIFPSAPRGFSLPNPNLNLNLNQSLNLEQPNTTTTTPSMAMIPLVRMTDLGLPKKRQMRDVVRRTRMVYDSVHVLAMAKDKGYFNARRGRSDLKASAIMRSRGLWLNRNMRIVGAIPGICIGDVFLYRMELCVVGLHGEPQAGIDYLPGSMSSNGDPIATSVIVSGGYEGDVDEGDVIILSGHGGQDKNRKQVFHQKLEEGDLAMERSMHYGIEVRVIRAVRYEGTSSTSGKVYVYDGLYRIVESWCDVGKSSFGVLKFMLSRIDGQAKMGSLVLKEAFLRRNDPSCYKPMCIISPDISNGMERVGIRLFNDIDECKDPMYFEYLPRATLFPFEFHPRGNETGCKCVGSCGEGCICFMRNGNIFPYSQSGLLLKGKPVIFECGPDCSCPPHCRNRVTQQGINHRLEVFRSLETGWGVRSFDLIQAGTFICEYSGVVLTREQAEIMTMNGDSLIYPNRFSNRWTEWGNLSLIDDGYALPSYPSILPLNFALDVSRMRNVACYISHSSTPNMMVQFVVHDRNNQFYLKTMLFAMESIPPLREFSLDYGVSDDVLIRELAMHN 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01293 567 ProSiteProfiles Pre-SET domain profile. 349 407 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo4g01293 567 Pfam SAD/SRA domain 120 274 IPR003105 -
Mepo4g01293 567 SUPERFAMILY PUA domain-like 102 291 IPR015947 -
Mepo4g01293 567 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 58 553 - -
Mepo4g01293 567 Pfam Pre-SET motif 305 402 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo4g01293 567 SMART G9a_1 116 274 IPR003105 -
Mepo4g01293 567 ProSiteProfiles YDG domain profile. 121 270 IPR003105 -
Mepo4g01293 567 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 566 IPR025794 GO:0016571
Mepo4g01293 567 ProSiteProfiles SET domain profile. 410 553 IPR001214 GO:0005515
Mepo4g01293 567 SUPERFAMILY SET domain 295 554 IPR046341 -
Mepo4g01293 567 Pfam SET domain 421 553 IPR001214 GO:0005515
Mepo4g01293 567 Gene3D SET domain 284 561 IPR046341 -
Mepo4g01293 567 SMART preset_2 302 394 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo4g01293 567 Gene3D - 102 283 IPR036987 -
Mepo4g01293 567 SMART set_7 410 559 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01293 Mepo-Chr4 16615557 16617260 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01293 101 565 Su(var)3-9 homologs AT1G73100 37.209 1.68e-97 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mepo4g01293 SAD_SRA 6.4e-43 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01293 K11420 - gmx:100795514 769.615