Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01285 ATGAGTAGTTGTGGAAGGGAAGGTGTGGTGAGACAATATGTAAGATCAAAGGTTCCTCGTTTAAGATGGACACCTGAACTTCATCGTTGCTTTGTTTATGCCATTGAAACTCTTGGTGGTCATCAAAAGGCTACTCCTAAGCTTGTTCTTCAGTTGATGGATGTTAAAGGGTTAACAATTTCACATGTTAAGAGCCACTTGCAGATGTATAGGAGTATGAGAGGTGGTGACTCATGCAAACAAGATAGGACTACTTTCGTACATAAAAAACAATCTTTTCAGGAGCATGATGATGATGGGTTTGGAGATCATGAATCTCTTGGAATGGAATCTGATTCTCTCTTTAGCTACAGAAATTTCTCCCCAAAAAGAGCTAGAATCGAGAAGAGAAATTCCCTCTCAGGAATCCTTGAATGCAGAGAAAGAATATGTGAAGAAGTTCCAAATCCATACACTACTTTTTATGATTATGTGCAGGACATGGTTCAGCAACAGCAAAAGGGAATAAAGGAGATTTGTTTTGTTGGTTCAATATGGCATACTCCTCAACCACAATATTTCACAATCTTTCCTTTGCTACCAAAACAAGAAACTGATTTGCTCCAGGTTACCAAGTTAAATGAAAAAAAGCATGTGAATGAAATTGGCAAGACTAAGAGTGTACGTGCAGAAGATGAAGAAGATATAAGGGGTTGTGAGTTGTCATTATCAATTTCATTGCCCAATATTTCCCCTCAGAGAAGTAATGCTTCTTCAGCCAATGATATGAGAAACTCTGGATTTAGCAACTATATGGGTTGTTCCACTGTCCAAAACATAACTAATTTGGACCTATCTTTGGCCATTTGA 849 0.3804 MSSCGREGVVRQYVRSKVPRLRWTPELHRCFVYAIETLGGHQKATPKLVLQLMDVKGLTISHVKSHLQMYRSMRGGDSCKQDRTTFVHKKQSFQEHDDDGFGDHESLGMESDSLFSYRNFSPKRARIEKRNSLSGILECRERICEEVPNPYTTFYDYVQDMVQQQQKGIKEICFVGSIWHTPQPQYFTIFPLLPKQETDLLQVTKLNEKKHVNEIGKTKSVRAEDEEDIRGCELSLSISLPNISPQRSNASSANDMRNSGFSNYMGCSTVQNITNLDLSLAI 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01285 282 SUPERFAMILY Homeodomain-like 17 72 IPR009057 -
Mepo4g01285 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Mepo4g01285 282 NCBIfam myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
Mepo4g01285 282 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 13 111 IPR044847 GO:0000976|GO:0006355|GO:0010158
Mepo4g01285 282 Gene3D - 18 74 - -
Mepo4g01285 282 FunFam Myb family transcription factor 17 75 - -
Mepo4g01285 282 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01285 Mepo-Chr4 16506492 16510642 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01285 1 121 G2-like Transcription Factor Family AT1G14600 51.181 9.71e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo4g01285 Myb_DNA-binding 1.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01285 - - gmx:100810994 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g01285 4 16506492 16510642 Mepo4g01285 4 16506492 16510642 ECH