Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01254 ATGGTGGTTAATATCACATCACATGATCCTGCCTGTGTTGTGCGCTGTTCTCTGCACGTTGGCTTGCAACCAGAAGTTCAGAACCCTAATGTTGTGCGTAGTTGTGCTGCTGTTATTCTTCACTTTGTTTCAATAGAATATCTATTTGTCCAAAGCACCCTATTTAGACGCGCCTGGTTTATTCGTTTTTTATTCTTCACTAGCTTAATTTGTGATTTAGTGTGTTTTTGCATTTCTTTACTCGCTAGGATTCCAGATGATTTTCTGAGGAAATATGGGGCCCAGCTTTCGACTATCACAACCCTCACTGTTTCTGATGGCACCGTCTGGCGTCTAAGATTGAAAAAGGTCGACAACCGAATTTGTTTTGTTGATGGCTGGCAAGATTTTGTTCAACGTTGCTCCATTGGCATTGGATAA 420 0.4143 MVVNITSHDPACVVRCSLHVGLQPEVQNPNVVRSCAAVILHFVSIEYLFVQSTLFRRAWFIRFLFFTSLICDLVCFCISLLARIPDDFLRKYGAQLSTITTLTVSDGTVWRLRLKKVDNRICFVDGWQDFVQRCSIGIG 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01254 139 SUPERFAMILY DNA-binding pseudobarrel domain 75 138 IPR015300 -
Mepo4g01254 139 Gene3D - 65 139 IPR015300 -
Mepo4g01254 139 ProSiteProfiles B3 DNA-binding domain profile. 84 139 IPR003340 GO:0003677
Mepo4g01254 139 PANTHER B3 DOMAIN-CONTAINING 65 139 - -
Mepo4g01254 139 Pfam B3 DNA binding domain 83 135 IPR003340 GO:0003677
Mepo4g01254 139 CDD B3_DNA 63 139 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01254 Mepo-Chr4 16143576 16144636 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01254 83 139 B3 DNA Binding Superfamily AT3G18990 56.140 2.64e-16 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01254 - - mtr:25482671 97.8265