Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01246 ATGGATCCTACTATGAACCATGTTGGACATGGAGGAATGGATATACAGATTATGCATGAGAGTGATAGATATGAGCTTGTACGTGATATTGGTTCTGGGAATTTTGGGGTGGCTAGGCTTATGAGAGATAAGCATACTAATCAACTTGTTGCTGTCAAGTATATTGAGAGAGGTGATAAGATAGATGAAAATGTACAAAGGGAAATTATAAACCATAGATCACTGAGGCATCCCAATATTGTGAGGTTCAAGGAGGTCATACTTACCCCTACACATTTAGCTATTGTGATGGAATATGCTTCTGGAGGAGAGCTATTTGAACGAATATGCAATGCAGGACGGTTCAGCGAGGATGAGGCACGCTTTTTCTTCCAACAACTTATATCAGGGGTTAGCTACTGTCATGCAATGCAAGTATGTCATCGTGATTTGAAGTTGGAGAATACATTGCTCGATGGTAGTCCGGCTCCTCGTTTGAAGATTTGTGATTTTGGGTATTCAAAGTCCTCGGTGCTACATTCACAACCAAAATCTACGGTCGGTACCCCTGCTTATATTGCTCCTGAAGTTTTGCTTAAGAAGGAATATGATGGCAAGATTGCAGATGTGTGGTCTTGCGGGGTGACCTTATATGTTATGTTGGTGGGTGCGTATCCTTTCGAGGATCCGGAGGAGCCTAAAAATTTCCGGAAGACTATTCATAGGATTTTGAAAGTCCAATACTCAATACCTGATTATGTTCAAATATCTCCCGAGTGCCGTCATCTGATCTCAAGGATCTTCGTTGGAGACCCTGCACAGAGAATAAGCATGGCGGAGATTCGAAACCACGATTGGTTTTTGAAGAACCTTCCAGCTGATCTTATCGTTGGGAATACAACGAGCGATCAGTTTCAGGAGCCTGAACAACCAATGCAGACAATTGAAGAAATAATGCAGATAATTAGCGAGGCTACTATTCCGGCAGCCGGAACTCGTCAGTCTCTCACTCAGTATCTTACCGGTAGCTTGGACATCGATGACGAAATGGACGAGGATATAGATACTGATCCTGACCTTGATATCGATAGCAGTGGTGAAATAGTTTATGCAATGTAA 1098 0.4244 MDPTMNHVGHGGMDIQIMHESDRYELVRDIGSGNFGVARLMRDKHTNQLVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILKVQYSIPDYVQISPECRHLISRIFVGDPAQRISMAEIRNHDWFLKNLPADLIVGNTTSDQFQEPEQPMQTIEEIMQIISEATIPAAGTRQSLTQYLTGSLDIDDEMDEDIDTDPDLDIDSSGEIVYAM 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01246 365 SUPERFAMILY Protein kinase-like (PK-like) 17 315 IPR011009 -
Mepo4g01246 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Mepo4g01246 365 ProSiteProfiles Protein kinase domain profile. 24 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01246 365 PANTHER SERINE/THREONINE KINASE 23 309 - -
Mepo4g01246 365 FunFam Serine/threonine-protein kinase SRK2E 15 99 - -
Mepo4g01246 365 Pfam Protein kinase domain 24 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01246 365 SMART serkin_6 24 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01246 365 Gene3D Phosphorylase Kinase; domain 1 5 99 - -
Mepo4g01246 365 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
Mepo4g01246 365 FunFam Serine/threonine-protein kinase SRK2E 100 288 - -
Mepo4g01246 365 Gene3D Transferase(Phosphotransferase) domain 1 100 288 - -
Mepo4g01246 365 CDD STKc_SnRK2 23 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01246 Mepo-Chr4 16032665 16035833 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01246 17 289 CBL-interacting serine-threonine protein kinases AT4G24400 43.262 2.63e-69 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Mepo4g01246 Pkinase 2.4e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01246 K14498 - gmx:100804702 643.269