Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01216 ATGACTATGGATGAAGGGGACAGTAGCTCTGAGTGGAGCTGGGAGCAAGATAAGGCATTTGAAAATGCCTTGGCGACGTATCCTGAGGATGATTCGGATCGATGGGAGAAGATTGCGGCCGATGTACCGGGGAAGACTATGGAAGAAATTAAGCAGCATTATGAGCTCTTGGCTGATGATATTAGCCAGATTGAGGCTGGTTGTGTGCCTTTACCATCATATAATTCTTCTTCGGAGGGTTCAACAAGTCATGCTAGCGATGAAGGAGTTGGGGGGAAGAAGGGTGGTCACAACGGCCACAAAAACGATGAGTCTAACCATGGAACTAAGGGCTCAAGATCTGATCAAGAACGACGAAAGGGCATTGCTTGGACTGAGGAAGAACACAGGTTATTTCTTCTGGGCCTGGACAAGTACGGAAAAGGCGACTGGCGAAGCATTTCAAGAAACTTTGTTGTAACCCGAACACCAACACAAGTAGCTAGCCATGCGCAAAAATACTTCATTCGACTGAACTCGATGAACAAAGACAGAAGGCGATCGAGCATTCATGACATTACAAGCGTTAACAACGGAGATGTTTCAACGCCTCAAGGACCCATCACTGGTCAAACAAACGGTTCATCTGGAAATTCTGCTGGCAAATCAGTCAAACAAGCTGTTCCATCAACAACCGGGCTACCAGGTGCAGGAATGTATGCTGCCCCTACCATTGGACAACCGATAGGAGGACCTTTAGTATCTGCTGTTGGCACACCTGTGAATCTTTCCGCACCTCCACACATGGCTTATGGTATTCGAGCACCAGTTCCCGGTACAGTTGTGTCCGGTGCACCAGTGAATATGGTCCCTATGACATACCCTATGTCTCATCATACTTCTGCTCCTCACAGGTAA 897 0.476 MTMDEGDSSSEWSWEQDKAFENALATYPEDDSDRWEKIAADVPGKTMEEIKQHYELLADDISQIEAGCVPLPSYNSSSEGSTSHASDEGVGGKKGGHNGHKNDESNHGTKGSRSDQERRKGIAWTEEEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVNNGDVSTPQGPITGQTNGSSGNSAGKSVKQAVPSTTGLPGAGMYAAPTIGQPIGGPLVSAVGTPVNLSAPPHMAYGIRAPVPGTVVSGAPVNMVPMTYPMSHHTSAPHR 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01216 298 ProSiteProfiles SANT domain profile. 124 172 IPR017884 -
Mepo4g01216 298 MobiDBLite consensus disorder prediction 69 85 - -
Mepo4g01216 298 MobiDBLite consensus disorder prediction 185 221 - -
Mepo4g01216 298 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 115 172 IPR017930 -
Mepo4g01216 298 FunFam transcription factor MYB1R1 122 173 - -
Mepo4g01216 298 Pfam Myb-like DNA-binding domain 123 168 IPR001005 -
Mepo4g01216 298 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
Mepo4g01216 298 Gene3D - 10 57 - -
Mepo4g01216 298 MobiDBLite consensus disorder prediction 68 120 - -
Mepo4g01216 298 NCBIfam myb-like DNA-binding domain, SHAQKYF class 120 170 IPR006447 GO:0003677
Mepo4g01216 298 CDD SANT 123 168 IPR001005 -
Mepo4g01216 298 FunFam Transcription factor SRM1 4 71 - -
Mepo4g01216 298 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Mepo4g01216 298 SUPERFAMILY Homeodomain-like 10 64 IPR009057 -
Mepo4g01216 298 PANTHER TRANSCRIPTION FACTOR KUA1 7 291 - -
Mepo4g01216 298 SMART sant 120 170 IPR001005 -
Mepo4g01216 298 SMART sant 8 60 IPR001005 -
Mepo4g01216 298 Gene3D - 122 174 - -
Mepo4g01216 298 ProSiteProfiles Myb-like domain profile. 116 168 IPR001005 -
Mepo4g01216 298 MobiDBLite consensus disorder prediction 1 16 - -
Mepo4g01216 298 SUPERFAMILY Homeodomain-like 118 173 IPR009057 -
Mepo4g01216 298 CDD SANT 11 57 IPR001005 -
Mepo4g01216 298 MobiDBLite consensus disorder prediction 178 221 - -
Mepo4g01216 298 MobiDBLite consensus disorder prediction 90 120 - -
Mepo4g01216 298 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01216 Mepo-Chr4 15747489 15754363 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo4g01216 Myb_DNA-binding 1.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01216 - - gmx:100797809 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g01216 4 15747489 15754363 Mepo4g01216 4 15747489 15754363 ECH