Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01185 ATGGGTTTTGGATTTTCCATCATTCTTCACCTTGTTCTTCTCTTTTCTATGATGTTTGTTTCTGCATGGTCACAAGATGATGCTGCAATGCAAAAGCTGAAAACTTCAATCAAATCATCAAGCAGTAATCTTGATTGGTCAAACTCAGATTATTGCAAATGGGAGAAAGTTTCTTGTAATGGAAATCGTGTCACTGCAATTCAAATTTCAGATAAAAACATTCAAGGTTCTTTACCAAAAGAATTGATGCAACTCACTGAGTTAACTCGTTTTGAATGCAATGGAAACGCTTTATCTGGTGATTTTCCTTACATGCCAAATTCACTTCAGTATTTGAATATTGATACCAACAATTTCGCTTCGATGCCGAGTGATTTCTTCACCAACATGAGTAATTTGATTGATGTGAGTATTGGTTATAACCCTTTTCCTCAGTGGCAAATTCCTTCTAGTCTTAAGAATTGTTTAGCCCTTCAGAAATTTTCTGCTATAAATGCTAGTTTTGTTGGTATAATCCCTGAATTCTTTGGAAAAGATACTTTTCCAGGTTTGACTGATTTGAAGGTATCTTTCAATTTTCTTGAAGGTAATTTGCCTAATAGTTTATCAGGTAGTTCTATATTGAATCTTTGGGTAAATGGTCAAAAGAGTAATAATAAACTCAATGGCACACTTTCTGTTTTGCAAAATATGACATCATTGAAACAAATTTGGGTTCATGGTAATTCGTTTACTGGTCCAATACCTGATTTATCGAATCATGATCAATTGTTTGATGTTAGTTTGAGAGATAATCAGTTAACCGGTGTTGTTCCATCGTCTTTAACTTCGCTTCAAAGTTTAACGGTTGTTAATTTGACAAACAATTATCTTCAAGGGTCACTTCCAAAGTTTCAAAATAGTGTTCGTGTTGATAATGATATTGATAGAGGGATTAATAGCTTTTGCACTAAGGTTGTTGGTCAACCGTGTAGTCCGGTTGTTAATGCGTTGCTTTCGGTTGTTGAGCCTTTTGGTTATCCTCTTGAACTTGCTAAAAGCTGGAAAGGTAATGACCCTTGTGGTGGTGATAGTTGGAAAGGGGTTATTTGTGCTGCTGGTAACGTTTCAGTTATCAACTTTCAAAACATGGGTTTTTCTGGCAGTATATCGCCCAGTTTTGCTAGTCTTAGTTCTGTGACGAGGTTGCTTCTTAGTAATAATCATCTCACCGGCACTATACCTAAGGAGCTTGCTAGTTTGCCGGCTTTGAAAGAGCTAGATGTTTCGAGTAATGCATTGTATGGTCAGATACCGTTGTTTCGCGGAGATGTTGTTGTTAAAACCAGTGGAAATCCTGATATTGGAAAAGATAAACCTCATGACTCGCCCAACAGCCCTGGCTCTAGTTCTGGAGGTAAAGATAAGAAGAAAGTTAGTGTTGGAGCGATTGTTGGGATTGTGATGGGGATTGTTGGCTTAATAATTGGTGTCGGGGTTTTGGTATTTTTTATGTATTGTAGAAGACATAATAAGCGTGATGGAAAAATTCAAACTCCGAATGCGATAGTGATACATCCTCATCATTCCGGAGAAGGAAATGGTGTGAAAATAAGTGTTGCGGCAGCTGAAAGTTCTGGTTCCGGCGTTACAGGAGGAACTGGTGGATTTAGTCCATCGAGGAGTGTTAAAAATGTGGAAGCTGGTAGTATGGTGATTTCAATTCAAGTGTTGAGAGAAGTTACGGACAATTTTAGTGAAAAGAACATATTGGGAAAAGGCGGGTTTGCCACTGTATACAAAGGAGAGTTGGATGATGGAACAAAGATTGCAGTTAAAAGGATGAAATCTGAAATGGTTGGTGACCAAGGGCTGAATGAGATCAAGTCCGAAATCGCGGTTCTCACTAAGGTTCGACACAGGCATTTGGTTGCACTCCTTGGCTATTGCTTGGACGAAAATGAGAAACTTCTTGTCTTTGAATACATGCCTCAGGGAACTCTTAGTCAACATCTCTTTGATTGGAAAGACGACGGGTTGAAACTGCTCGGATGGAAGAGAAGGCTTTCCATTGCCTTAGATGTTGCTAGAGGTGTTGAATATCTTCATGGTTTGGCACAACAAATTTTCATTCACAGGGATCTGAAACCATCAAATATCTTGCTTGGAGATGATATGCGTGCTAAAGTAGCCGACTTTGGATTAGTTCGACTTGCTCCAGAAGGACAAGCTTCATTCCAGACTAAACTTGCTGGCACTTTTGGATATATGGCACCAGAGTATGCAGTTACCGGCCGAGTCACCACAAAGGTAGACGTATACAGCTATGGCGTGATTCTTATGGAGATGATAACGGGAAAGAAGGCAATTGATAACAGCCGACAAGATGAGAACATCCACCTTGTTACATGGTTCCGCAGGATGCTACTGAACAAAGACTCATTTGAAAAGGTCATTGATCCAGCAATGGACATCGACGAGGAAGGCTTGGAGAGTTTCAGGACTATTGCAGAATTGGCCAGCCACTGTTGTGCAAGGGAGCCTCATCAGCGTCCCGACATGGGACACGTAGTGAATGTGCTAGCTCCTCTTGTCGAGATTTGGAAGCCGGCTGAACCTGATGCTGATGACATATATGGGATTGACTTGGATATGAGTTTGCCTCAAGCACTGATTAAGTGGCAGAATCATGAAGGAATGAGCAGCACACTTGATGTTTCGTATTCTTCGTCGATGGCTGCTAGTTGTGAGAATACACAGTCAAGCATACCACCTAGGTCTCCTGGATTTGCCGATTCCTTTACATCTGCTGATGCAAGATGA 2802 0.4026 MGFGFSIILHLVLLFSMMFVSAWSQDDAAMQKLKTSIKSSSSNLDWSNSDYCKWEKVSCNGNRVTAIQISDKNIQGSLPKELMQLTELTRFECNGNALSGDFPYMPNSLQYLNIDTNNFASMPSDFFTNMSNLIDVSIGYNPFPQWQIPSSLKNCLALQKFSAINASFVGIIPEFFGKDTFPGLTDLKVSFNFLEGNLPNSLSGSSILNLWVNGQKSNNKLNGTLSVLQNMTSLKQIWVHGNSFTGPIPDLSNHDQLFDVSLRDNQLTGVVPSSLTSLQSLTVVNLTNNYLQGSLPKFQNSVRVDNDIDRGINSFCTKVVGQPCSPVVNALLSVVEPFGYPLELAKSWKGNDPCGGDSWKGVICAAGNVSVINFQNMGFSGSISPSFASLSSVTRLLLSNNHLTGTIPKELASLPALKELDVSSNALYGQIPLFRGDVVVKTSGNPDIGKDKPHDSPNSPGSSSGGKDKKKVSVGAIVGIVMGIVGLIIGVGVLVFFMYCRRHNKRDGKIQTPNAIVIHPHHSGEGNGVKISVAAAESSGSGVTGGTGGFSPSRSVKNVEAGSMVISIQVLREVTDNFSEKNILGKGGFATVYKGELDDGTKIAVKRMKSEMVGDQGLNEIKSEIAVLTKVRHRHLVALLGYCLDENEKLLVFEYMPQGTLSQHLFDWKDDGLKLLGWKRRLSIALDVARGVEYLHGLAQQIFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGQASFQTKLAGTFGYMAPEYAVTGRVTTKVDVYSYGVILMEMITGKKAIDNSRQDENIHLVTWFRRMLLNKDSFEKVIDPAMDIDEEGLESFRTIAELASHCCAREPHQRPDMGHVVNVLAPLVEIWKPAEPDADDIYGIDLDMSLPQALIKWQNHEGMSSTLDVSYSSSMAASCENTQSSIPPRSPGFADSFTSADAR 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01185 933 ProSitePatterns Serine/Threonine protein kinases active-site signature. 703 715 IPR008271 GO:0004672|GO:0006468
Mepo4g01185 933 Gene3D Ribonuclease Inhibitor 327 452 IPR032675 -
Mepo4g01185 933 PANTHER OSJNBA0070M12.3 PROTEIN 9 933 - -
Mepo4g01185 933 SMART serkin_6 578 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01185 933 Gene3D Phosphorylase Kinase; domain 1 550 655 - -
Mepo4g01185 933 ProSiteProfiles Protein kinase domain profile. 578 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01185 933 SUPERFAMILY Protein kinase-like (PK-like) 556 854 IPR011009 -
Mepo4g01185 933 CDD TM_EGFR-like 473 506 - -
Mepo4g01185 933 CDD STKc_IRAK 584 857 - -
Mepo4g01185 933 FunFam Receptor-like kinase TMK4 24 321 - -
Mepo4g01185 933 Pfam Leucine rich repeat 386 427 IPR001611 GO:0005515
Mepo4g01185 933 FunFam receptor protein kinase TMK1 543 655 - -
Mepo4g01185 933 Gene3D Ribonuclease Inhibitor 23 322 IPR032675 -
Mepo4g01185 933 FunFam Leucine-rich repeat receptor-like kinase 326 451 - -
Mepo4g01185 933 Gene3D Transferase(Phosphotransferase) domain 1 656 867 - -
Mepo4g01185 933 FunFam receptor protein kinase TMK1 656 873 - -
Mepo4g01185 933 ProSitePatterns Protein kinases ATP-binding region signature. 584 606 IPR017441 GO:0005524
Mepo4g01185 933 SUPERFAMILY L domain-like 42 434 - -
Mepo4g01185 933 MobiDBLite consensus disorder prediction 444 469 - -
Mepo4g01185 933 Pfam Protein kinase domain 579 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01185 933 MobiDBLite consensus disorder prediction 910 933 - -
Mepo4g01185 933 Pfam Leucine rich repeat N-terminal domain 329 364 IPR013210 -
Mepo4g01185 933 Pfam Leucine rich repeat N-terminal domain 25 60 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01185 Mepo-Chr4 15455836 15459628 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01185 59 860 Receptor kinase-like Gene Family AT5G07280 30.619 1.06e-86 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Mepo4g01185 Pkinase 1.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01185 K00924 - gmx:100776064 1221.84