Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01180 ATGGGTTTCAGAGTTTCCAACGTTCATCTCGTTGTTGTGTTGTTTTCTATGATGTTTTTTGCTGCATGCTCTCAAGATGATGTTGTAATGCAAAAGCTGAAAAGTTCTATAAAATCATCAAACAATGATCTTGATTGGTCAGACTCAGATTCTCGCAAATGGAATCGTATTCAGTTTAATGGAAATAAGGTCACTGCAATTCAAATTGCGGGTCTCAATATTCAAGGTTCTTTACCAAAAGAATTGGTGCAACTCACTCAGTTAACTCGTTTTGAATGCAATGGAAATGGTTTATCTGGTGATTTTCCTTACATGCCAAGTTCACTTCAGTTTTTGTATATTAACAACAACAATTTCACTTCCATGCCAAGTGATTTCTTCACCAACATGAGTAATTTGATTGATGTGAATATTGGTTATAACCCTTTTCCTCAGTGGCAAATTCCTTCTAGTCTTAGGAATTGTTTAGCCCTTCAAATTTTTTCTGCTATGAATGCTAGTTTAGTTGGTATAATCCCCGAACTCTTTGGAAAAGAAACTTTTCCAGGTTTGACTGATTTGTATCTGTCTTTCAATTCTCTTGAAGGGAATTTGCCTAATAGTTTATCTGGTAGTTCTATAGAAAAACTTTGGGTGAATGGTCAAAATAGTATTAATAAACTCAATGGTACACTTTCTGTTTTGCAAAATATGACATCATTGAAACAAATTTGGGTTCATGGCAATTCTTTTACTGGTCCTATACCGGATTTATCGAATCATGATCAATTGTTTGATGTTAGTTTGAGAGATAATCAGTTAACCGGTGTTGTTCCACTGTCTTTAACTTCGCTTCAAAATTTAACAGTTGTTAATTTGACAAACAATTATCTTCAAGGGTCACTTCCGAAGTTTCAAAATAGTGTTCGTGTTGATAATGTTATTGATAGAGGGATTAATAGCTTTTGTACTAAGGTTGTTGGTCAACCATGTAGTCCGGTTGTTAATGCTTTGCTTTCTGTTGTTGAACCTTTTGGTTATCCTCTTAAACTTGCTCAAAGTTGGAAAGATAATGACCCTTGTGGTAATAATTGGTTAGGAGTTGTTTGTTCTAGTGGCAACATTACCATTATTGACTTTCAAAACAAGGGTTTTACTGGCAGTATATCTCCTAATTTTGCAAGCTTTAGTTCTTTGACGAAGTTGCTTCTTGCTAACAATAATCTCACCGGTACTATACCTAAGGAGCTTGCTAGTATGCCTCAGCTGAAAGAGCTAGATGTTTCAAATAATTTGTTGTATGGTCAGATACCATCGTTTCGCAGAGATGTGGTTGTTAAAACCGGTGGTAATCCTGATATTGGAAAGGATAAACCTCATGACTCACCTGACAGCCCCAAATCTAGTTCCGACTCTAGTTCTGGAGGTGAAGATAAGAAGAAATTGAGTGTTGGAGCAATTGTTGGGATTGTGATAGGGATTGTATGCTTAATTGCTGTACCGGTTGTGGTATTTGTTCTGTATCGTAGAAGACAAAATAAGCGTGATGACAAAGTTCAATCTCCGAATGCTATTGTGGTACATCCTCGTCACTCTGGAGATGGAAATGGTGTGAAAATAAGTGTTGCAGCATCTGGAAGTTCTGGTGCCGACGTTTCAGGAGGAACTTATGGATTTAGTCCATCGAGTAGTGTTCAAAATGTGGAAGCTGGTAATATGGTGATTTCAATTCAAGTTTTGAGAGAAGTTACAAACAATTTTAGTGAAAGGAATATATTGGGGAAAGGCGGATTCGCTACTGTATACAAAGGAGAATTGGACGATGGAACAAAGATTGCAGTAAAAAGGATGCATTCTGAAATGGTTGGTGATGAAGGGTTGAATGAGATCAAGTCCGAAATTACGGTTCTCACTAAGGTTCGACACAGGCATTTGGTTGCACTCCATGGCTATTGCTTGGACGAAAATGAGAAACTTCTTGTCTTTGAATACATGCCTCAAGGAACTCTTAGTCAACATCTCTTTGATTGGAAAGACGACGGGTTGAAACCGCTCGGATGGAAGAGAAGGCTTTCCATTGCCTTAGATGTTGCTAGAGGTGTTGAATATCTTCATGGTTTGGCACAACAAATTTTCATCCACAGGGATCTGAAACCATCAAATATTTTGCTTGGAGATGATATGCGCGCTAAAGTTGCCGACTTTGGATTAGTTCGGCTTGCTCCAGAAGGACAAGCTTCATTCCAGACTAGACTTGCAGGAACTTTTGGATATATGGCACCAGAGGAATTTCGTAGTGAATCGCTTCACCAATACGGTACATGTGTGGTTTTCTCTTCACCTTTCTACTTTACGAATCTTGAAGGAATGAGCAACACACTCGATGTTTCGTATTGTTCGTCAAAGGCTGCAAGTTCTGATAATACACAGTCGAGTATACCACCCCGGTCTCCTGGATTTGCAGATTCCTTTACATCTTCTGATGCACGATGA 2472 0.3823 MGFRVSNVHLVVVLFSMMFFAACSQDDVVMQKLKSSIKSSNNDLDWSDSDSRKWNRIQFNGNKVTAIQIAGLNIQGSLPKELVQLTQLTRFECNGNGLSGDFPYMPSSLQFLYINNNNFTSMPSDFFTNMSNLIDVNIGYNPFPQWQIPSSLRNCLALQIFSAMNASLVGIIPELFGKETFPGLTDLYLSFNSLEGNLPNSLSGSSIEKLWVNGQNSINKLNGTLSVLQNMTSLKQIWVHGNSFTGPIPDLSNHDQLFDVSLRDNQLTGVVPLSLTSLQNLTVVNLTNNYLQGSLPKFQNSVRVDNVIDRGINSFCTKVVGQPCSPVVNALLSVVEPFGYPLKLAQSWKDNDPCGNNWLGVVCSSGNITIIDFQNKGFTGSISPNFASFSSLTKLLLANNNLTGTIPKELASMPQLKELDVSNNLLYGQIPSFRRDVVVKTGGNPDIGKDKPHDSPDSPKSSSDSSSGGEDKKKLSVGAIVGIVIGIVCLIAVPVVVFVLYRRRQNKRDDKVQSPNAIVVHPRHSGDGNGVKISVAASGSSGADVSGGTYGFSPSSSVQNVEAGNMVISIQVLREVTNNFSERNILGKGGFATVYKGELDDGTKIAVKRMHSEMVGDEGLNEIKSEITVLTKVRHRHLVALHGYCLDENEKLLVFEYMPQGTLSQHLFDWKDDGLKPLGWKRRLSIALDVARGVEYLHGLAQQIFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGQASFQTRLAGTFGYMAPEEFRSESLHQYGTCVVFSSPFYFTNLEGMSNTLDVSYCSSKAASSDNTQSSIPPRSPGFADSFTSSDAR 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01180 823 FunFam Receptor-like kinase TMK4 24 321 - -
Mepo4g01180 823 SUPERFAMILY L domain-like 58 431 - -
Mepo4g01180 823 FunFam Leucine-rich repeat receptor-like kinase 326 450 - -
Mepo4g01180 823 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Mepo4g01180 823 Gene3D Ribonuclease Inhibitor 23 322 IPR032675 -
Mepo4g01180 823 FunFam receptor protein kinase TMK1 545 657 - -
Mepo4g01180 823 ProSiteProfiles Protein kinase domain profile. 580 823 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01180 823 Gene3D Ribonuclease Inhibitor 327 451 IPR032675 -
Mepo4g01180 823 Gene3D Transferase(Phosphotransferase) domain 1 658 770 - -
Mepo4g01180 823 SUPERFAMILY Protein kinase-like (PK-like) 556 760 IPR011009 -
Mepo4g01180 823 Pfam Leucine Rich repeats (2 copies) 391 431 IPR025875 -
Mepo4g01180 823 ProSitePatterns Protein kinases ATP-binding region signature. 586 608 IPR017441 GO:0005524
Mepo4g01180 823 Gene3D Phosphorylase Kinase; domain 1 550 657 - -
Mepo4g01180 823 Pfam Protein kinase domain 581 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01180 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 705 717 IPR008271 GO:0004672|GO:0006468
Mepo4g01180 823 MobiDBLite consensus disorder prediction 797 823 - -
Mepo4g01180 823 FunFam Os07g0541700 protein 658 748 - -
Mepo4g01180 823 SMART serkin_6 580 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01180 823 MobiDBLite consensus disorder prediction 441 471 - -
Mepo4g01180 823 PANTHER OSJNBA0070M12.3 PROTEIN 11 757 - -
Mepo4g01180 823 CDD TM_EGFR-like 476 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01180 Mepo-Chr4 15404794 15408407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01180 64 771 Receptor kinase-like Gene Family AT5G07280 31.141 1.69e-68 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Mepo4g01180 Pkinase 2.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01180 K00924 - gmx:100776064 951.429