Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01179 ATGGTTGATTTGGGAGTAGAACTATCAAATGCTCAAATTCACCGAAGATATGGAAATAGGTTACTCCCTTACAGGAAAATAACAGTTGATCCAAAGGGGCACCATGGAAGTTTCTCTACCATACAATCTGCTATTGATTCCATTCCTTCAAACAATAGGTATTGGACTTCCATCATTATAAAAGAAGGCATATACAGGGAGAAATTGAGAATTCCTTATGATAAGCCTTACATTATTATACAAGGAGCGGGGATGAGCAAGACAATAGTTGAATGGAATGACCATGCAACTACTTTACAGAGCCCTACGTTCTTTACCATGGCTGACAATATTGTGGTCAGATTTATTAGCTTTAGGAATTCATACAATAATCCAAGAAATCGTAACCCAGTGGTCCCTGCCGTAGCTGCGATGGTAAGTGGTGACAAGACTTACTTCTATAGTGTTGGCTTCTTTGGTTTTCAAGACACTTTGTGGGATGATCAAGGAAGACATTACTACAAGAATTGTTTGATTGAAGGTGCTGTTGATTTTATATTTGGTGCTGGCCAGTCTTTATATGAGGAGTGTTCCATATCCGTAATTGCTGCTGCTCTAGGTCGACGGATTGCTGGTTTTATTACAGCACAAGGGAGAACAGGTCAAAATGATGCAAATGGTTTTGTTTTTAAGAATTGTAATGTGTATGGAGATGGAACTACATACTTGGGAAGACCATGGAGAGCTTATGCTAGAGTTCTATTCTACAATACCAATATGTCCAACATTGTAGTACCTACTGGTTGGGCGCCATGGGATTTCGTCGGACACGAGAACCGCATACAATTCGCAGAGTATAGAAATATTGGAGCTGGTTCAAAAACAAACAAACGAGTGAAATGGTTGAAGAAGTTGGATTGGACAACCGTTAATATAATGGCGAGTGACAGTTTTGTTGATAATGAAGGATGGCTTAAGATAGCTTCAGAAATTTAG 975 0.3918 MVDLGVELSNAQIHRRYGNRLLPYRKITVDPKGHHGSFSTIQSAIDSIPSNNRYWTSIIIKEGIYREKLRIPYDKPYIIIQGAGMSKTIVEWNDHATTLQSPTFFTMADNIVVRFISFRNSYNNPRNRNPVVPAVAAMVSGDKTYFYSVGFFGFQDTLWDDQGRHYYKNCLIEGAVDFIFGAGQSLYEECSISVIAAALGRRIAGFITAQGRTGQNDANGFVFKNCNVYGDGTTYLGRPWRAYARVLFYNTNMSNIVVPTGWAPWDFVGHENRIQFAEYRNIGAGSKTNKRVKWLKKLDWTTVNIMASDSFVDNEGWLKIASEI 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01179 324 Gene3D - 24 323 IPR012334 -
Mepo4g01179 324 Pfam Pectinesterase 34 296 IPR000070 GO:0030599|GO:0042545
Mepo4g01179 324 ProSitePatterns Pectinesterase signature 2. 172 181 IPR033131 -
Mepo4g01179 324 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 24 319 - -
Mepo4g01179 324 SUPERFAMILY Pectin lyase-like 25 320 IPR011050 -
Mepo4g01179 324 FunFam Pectinesterase 23 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01179 Mepo-Chr4 15398035 15401369 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01179 25 271 Carbohydrate Esterase AT2G19150 46.774 9.60e-77 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01179 - - aprc:113870328 422.935